Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33335 | 100228;100229;100230 | chr2:178537106;178537105;178537104 | chr2:179401833;179401832;179401831 |
N2AB | 31694 | 95305;95306;95307 | chr2:178537106;178537105;178537104 | chr2:179401833;179401832;179401831 |
N2A | 30767 | 92524;92525;92526 | chr2:178537106;178537105;178537104 | chr2:179401833;179401832;179401831 |
N2B | 24270 | 73033;73034;73035 | chr2:178537106;178537105;178537104 | chr2:179401833;179401832;179401831 |
Novex-1 | 24395 | 73408;73409;73410 | chr2:178537106;178537105;178537104 | chr2:179401833;179401832;179401831 |
Novex-2 | 24462 | 73609;73610;73611 | chr2:178537106;178537105;178537104 | chr2:179401833;179401832;179401831 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs779632637 | 0.061 | 0.999 | N | 0.437 | 0.24 | 0.381746406553 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
E/D | rs779632637 | 0.061 | 0.999 | N | 0.437 | 0.24 | 0.381746406553 | gnomAD-4.0.0 | 3.18546E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72001E-06 | 0 | 0 |
E/K | None | None | 0.999 | N | 0.555 | 0.479 | 0.357929162469 | gnomAD-4.0.0 | 4.10669E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59847E-06 | 0 | 3.31477E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1535 | likely_benign | 0.1362 | benign | -0.04 | Destabilizing | 0.999 | D | 0.579 | neutral | N | 0.452758029 | None | None | N |
E/C | 0.8929 | likely_pathogenic | 0.8756 | pathogenic | -0.474 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
E/D | 0.1319 | likely_benign | 0.1204 | benign | -0.601 | Destabilizing | 0.999 | D | 0.437 | neutral | N | 0.464473746 | None | None | N |
E/F | 0.8378 | likely_pathogenic | 0.8251 | pathogenic | -0.162 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/G | 0.1976 | likely_benign | 0.1883 | benign | -0.104 | Destabilizing | 1.0 | D | 0.588 | neutral | N | 0.445733269 | None | None | N |
E/H | 0.5949 | likely_pathogenic | 0.553 | ambiguous | 0.544 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/I | 0.4587 | ambiguous | 0.4214 | ambiguous | 0.07 | Stabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
E/K | 0.1839 | likely_benign | 0.1572 | benign | 0.117 | Stabilizing | 0.999 | D | 0.555 | neutral | N | 0.418048023 | None | None | N |
E/L | 0.5263 | ambiguous | 0.4741 | ambiguous | 0.07 | Stabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/M | 0.6261 | likely_pathogenic | 0.5751 | pathogenic | -0.226 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/N | 0.2743 | likely_benign | 0.2499 | benign | -0.052 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
E/P | 0.3866 | ambiguous | 0.2843 | benign | 0.047 | Stabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | N |
E/Q | 0.2242 | likely_benign | 0.2075 | benign | -0.071 | Destabilizing | 1.0 | D | 0.561 | neutral | N | 0.460742794 | None | None | N |
E/R | 0.331 | likely_benign | 0.3073 | benign | 0.359 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
E/S | 0.2187 | likely_benign | 0.2007 | benign | -0.183 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
E/T | 0.2548 | likely_benign | 0.2272 | benign | -0.119 | Destabilizing | 1.0 | D | 0.62 | neutral | None | None | None | None | N |
E/V | 0.2724 | likely_benign | 0.2465 | benign | 0.047 | Stabilizing | 1.0 | D | 0.639 | neutral | N | 0.487025318 | None | None | N |
E/W | 0.9354 | likely_pathogenic | 0.9221 | pathogenic | -0.159 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
E/Y | 0.7047 | likely_pathogenic | 0.6692 | pathogenic | 0.034 | Stabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.