Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33371 | 100336;100337;100338 | chr2:178536998;178536997;178536996 | chr2:179401725;179401724;179401723 |
N2AB | 31730 | 95413;95414;95415 | chr2:178536998;178536997;178536996 | chr2:179401725;179401724;179401723 |
N2A | 30803 | 92632;92633;92634 | chr2:178536998;178536997;178536996 | chr2:179401725;179401724;179401723 |
N2B | 24306 | 73141;73142;73143 | chr2:178536998;178536997;178536996 | chr2:179401725;179401724;179401723 |
Novex-1 | 24431 | 73516;73517;73518 | chr2:178536998;178536997;178536996 | chr2:179401725;179401724;179401723 |
Novex-2 | 24498 | 73717;73718;73719 | chr2:178536998;178536997;178536996 | chr2:179401725;179401724;179401723 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs2154137940 | None | 0.062 | N | 0.433 | 0.07 | 0.177238962908 | gnomAD-4.0.0 | 3.1849E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8599E-06 | 1.43484E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1113 | likely_benign | 0.0807 | benign | -0.505 | Destabilizing | 0.027 | N | 0.365 | neutral | N | 0.389437269 | None | None | I |
T/C | 0.5027 | ambiguous | 0.3907 | ambiguous | -0.296 | Destabilizing | 0.935 | D | 0.379 | neutral | None | None | None | None | I |
T/D | 0.6095 | likely_pathogenic | 0.514 | ambiguous | 0.38 | Stabilizing | 0.149 | N | 0.46 | neutral | None | None | None | None | I |
T/E | 0.5046 | ambiguous | 0.4071 | ambiguous | 0.302 | Stabilizing | 0.035 | N | 0.433 | neutral | None | None | None | None | I |
T/F | 0.5302 | ambiguous | 0.3922 | ambiguous | -1.034 | Destabilizing | 0.38 | N | 0.493 | neutral | None | None | None | None | I |
T/G | 0.3847 | ambiguous | 0.3039 | benign | -0.619 | Destabilizing | 0.149 | N | 0.484 | neutral | None | None | None | None | I |
T/H | 0.3792 | ambiguous | 0.2822 | benign | -0.877 | Destabilizing | 0.555 | D | 0.451 | neutral | None | None | None | None | I |
T/I | 0.2323 | likely_benign | 0.1578 | benign | -0.323 | Destabilizing | 0.062 | N | 0.433 | neutral | N | 0.391690927 | None | None | I |
T/K | 0.3228 | likely_benign | 0.2224 | benign | -0.273 | Destabilizing | 0.081 | N | 0.434 | neutral | None | None | None | None | I |
T/L | 0.1575 | likely_benign | 0.1038 | benign | -0.323 | Destabilizing | None | N | 0.162 | neutral | None | None | None | None | I |
T/M | 0.1681 | likely_benign | 0.1091 | benign | -0.099 | Destabilizing | 0.005 | N | 0.325 | neutral | None | None | None | None | I |
T/N | 0.1766 | likely_benign | 0.1219 | benign | -0.056 | Destabilizing | 0.211 | N | 0.318 | neutral | N | 0.439327372 | None | None | I |
T/P | 0.1573 | likely_benign | 0.145 | benign | -0.356 | Destabilizing | 0.741 | D | 0.405 | neutral | N | 0.410911406 | None | None | I |
T/Q | 0.2844 | likely_benign | 0.1993 | benign | -0.291 | Destabilizing | 0.003 | N | 0.133 | neutral | None | None | None | None | I |
T/R | 0.2595 | likely_benign | 0.1762 | benign | -0.004 | Destabilizing | 0.149 | N | 0.447 | neutral | None | None | None | None | I |
T/S | 0.1808 | likely_benign | 0.1323 | benign | -0.328 | Destabilizing | 0.052 | N | 0.377 | neutral | N | 0.393536367 | None | None | I |
T/V | 0.1871 | likely_benign | 0.1393 | benign | -0.356 | Destabilizing | 0.035 | N | 0.349 | neutral | None | None | None | None | I |
T/W | 0.8021 | likely_pathogenic | 0.7361 | pathogenic | -1.001 | Destabilizing | 0.935 | D | 0.448 | neutral | None | None | None | None | I |
T/Y | 0.4148 | ambiguous | 0.3413 | ambiguous | -0.726 | Destabilizing | 0.555 | D | 0.488 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.