Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33403 | 100432;100433;100434 | chr2:178536540;178536539;178536538 | chr2:179401267;179401266;179401265 |
N2AB | 31762 | 95509;95510;95511 | chr2:178536540;178536539;178536538 | chr2:179401267;179401266;179401265 |
N2A | 30835 | 92728;92729;92730 | chr2:178536540;178536539;178536538 | chr2:179401267;179401266;179401265 |
N2B | 24338 | 73237;73238;73239 | chr2:178536540;178536539;178536538 | chr2:179401267;179401266;179401265 |
Novex-1 | 24463 | 73612;73613;73614 | chr2:178536540;178536539;178536538 | chr2:179401267;179401266;179401265 |
Novex-2 | 24530 | 73813;73814;73815 | chr2:178536540;178536539;178536538 | chr2:179401267;179401266;179401265 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.925 | N | 0.426 | 0.135 | 0.323886383625 | gnomAD-4.0.0 | 7.33229E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.35657E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6203 | likely_pathogenic | 0.6256 | pathogenic | -0.837 | Destabilizing | 1.0 | D | 0.491 | neutral | None | None | None | None | N |
A/D | 0.4397 | ambiguous | 0.6247 | pathogenic | -0.452 | Destabilizing | 0.961 | D | 0.613 | neutral | N | 0.378932274 | None | None | N |
A/E | 0.4075 | ambiguous | 0.5996 | pathogenic | -0.59 | Destabilizing | 0.97 | D | 0.515 | neutral | None | None | None | None | N |
A/F | 0.5332 | ambiguous | 0.6401 | pathogenic | -0.885 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | N |
A/G | 0.1568 | likely_benign | 0.1643 | benign | -0.452 | Destabilizing | 0.031 | N | 0.147 | neutral | N | 0.40700431 | None | None | N |
A/H | 0.6602 | likely_pathogenic | 0.76 | pathogenic | -0.501 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
A/I | 0.4933 | ambiguous | 0.5527 | ambiguous | -0.345 | Destabilizing | 0.996 | D | 0.607 | neutral | None | None | None | None | N |
A/K | 0.6796 | likely_pathogenic | 0.838 | pathogenic | -0.751 | Destabilizing | 0.97 | D | 0.52 | neutral | None | None | None | None | N |
A/L | 0.3107 | likely_benign | 0.3742 | ambiguous | -0.345 | Destabilizing | 0.985 | D | 0.527 | neutral | None | None | None | None | N |
A/M | 0.3762 | ambiguous | 0.4302 | ambiguous | -0.401 | Destabilizing | 1.0 | D | 0.6 | neutral | None | None | None | None | N |
A/N | 0.3581 | ambiguous | 0.4597 | ambiguous | -0.461 | Destabilizing | 0.991 | D | 0.616 | neutral | None | None | None | None | N |
A/P | 0.8378 | likely_pathogenic | 0.9315 | pathogenic | -0.317 | Destabilizing | 0.994 | D | 0.601 | neutral | N | 0.461665514 | None | None | N |
A/Q | 0.5056 | ambiguous | 0.6277 | pathogenic | -0.713 | Destabilizing | 0.996 | D | 0.609 | neutral | None | None | None | None | N |
A/R | 0.5951 | likely_pathogenic | 0.7678 | pathogenic | -0.305 | Destabilizing | 0.996 | D | 0.604 | neutral | None | None | None | None | N |
A/S | 0.1041 | likely_benign | 0.1211 | benign | -0.691 | Destabilizing | 0.287 | N | 0.135 | neutral | N | 0.387455757 | None | None | N |
A/T | 0.1293 | likely_benign | 0.151 | benign | -0.743 | Destabilizing | 0.925 | D | 0.426 | neutral | N | 0.451968595 | None | None | N |
A/V | 0.2412 | likely_benign | 0.2761 | benign | -0.317 | Destabilizing | 0.98 | D | 0.457 | neutral | N | 0.458337207 | None | None | N |
A/W | 0.8842 | likely_pathogenic | 0.9303 | pathogenic | -1.049 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
A/Y | 0.6664 | likely_pathogenic | 0.7732 | pathogenic | -0.696 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.