Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33417 | 100474;100475;100476 | chr2:178536498;178536497;178536496 | chr2:179401225;179401224;179401223 |
N2AB | 31776 | 95551;95552;95553 | chr2:178536498;178536497;178536496 | chr2:179401225;179401224;179401223 |
N2A | 30849 | 92770;92771;92772 | chr2:178536498;178536497;178536496 | chr2:179401225;179401224;179401223 |
N2B | 24352 | 73279;73280;73281 | chr2:178536498;178536497;178536496 | chr2:179401225;179401224;179401223 |
Novex-1 | 24477 | 73654;73655;73656 | chr2:178536498;178536497;178536496 | chr2:179401225;179401224;179401223 |
Novex-2 | 24544 | 73855;73856;73857 | chr2:178536498;178536497;178536496 | chr2:179401225;179401224;179401223 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | None | N | 0.087 | 0.03 | 0.136095386433 | gnomAD-4.0.0 | 1.72826E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.686E-05 | 0 |
A/V | None | None | 0.062 | N | 0.377 | 0.125 | 0.149567049428 | gnomAD-4.0.0 | 7.07895E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.19065E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.519 | ambiguous | 0.4519 | ambiguous | -0.905 | Destabilizing | 0.824 | D | 0.321 | neutral | None | None | None | None | I |
A/D | 0.1766 | likely_benign | 0.1835 | benign | -0.432 | Destabilizing | 0.317 | N | 0.408 | neutral | N | 0.411314051 | None | None | I |
A/E | 0.1508 | likely_benign | 0.1752 | benign | -0.576 | Destabilizing | 0.081 | N | 0.383 | neutral | None | None | None | None | I |
A/F | 0.2255 | likely_benign | 0.2223 | benign | -0.926 | Destabilizing | 0.38 | N | 0.436 | neutral | None | None | None | None | I |
A/G | 0.14 | likely_benign | 0.1226 | benign | -0.264 | Destabilizing | 0.062 | N | 0.38 | neutral | N | 0.439463445 | None | None | I |
A/H | 0.3875 | ambiguous | 0.3748 | ambiguous | -0.251 | Destabilizing | 0.824 | D | 0.419 | neutral | None | None | None | None | I |
A/I | 0.1127 | likely_benign | 0.1097 | benign | -0.459 | Destabilizing | 0.081 | N | 0.38 | neutral | None | None | None | None | I |
A/K | 0.2613 | likely_benign | 0.3266 | benign | -0.509 | Destabilizing | 0.081 | N | 0.393 | neutral | None | None | None | None | I |
A/L | 0.1046 | likely_benign | 0.0974 | benign | -0.459 | Destabilizing | 0.001 | N | 0.215 | neutral | None | None | None | None | I |
A/M | 0.1659 | likely_benign | 0.1459 | benign | -0.608 | Destabilizing | 0.38 | N | 0.334 | neutral | None | None | None | None | I |
A/N | 0.1627 | likely_benign | 0.1457 | benign | -0.268 | Destabilizing | 0.235 | N | 0.415 | neutral | None | None | None | None | I |
A/P | 0.1793 | likely_benign | 0.1659 | benign | -0.372 | Destabilizing | None | N | 0.229 | neutral | N | 0.464204387 | None | None | I |
A/Q | 0.2183 | likely_benign | 0.231 | benign | -0.505 | Destabilizing | 0.38 | N | 0.352 | neutral | None | None | None | None | I |
A/R | 0.2641 | likely_benign | 0.3324 | benign | -0.122 | Destabilizing | 0.38 | N | 0.361 | neutral | None | None | None | None | I |
A/S | 0.0864 | likely_benign | 0.0784 | benign | -0.468 | Destabilizing | None | N | 0.087 | neutral | N | 0.423800559 | None | None | I |
A/T | 0.0767 | likely_benign | 0.0708 | benign | -0.538 | Destabilizing | 0.062 | N | 0.377 | neutral | N | 0.451371162 | None | None | I |
A/V | 0.0696 | likely_benign | 0.0732 | benign | -0.372 | Destabilizing | 0.062 | N | 0.377 | neutral | N | 0.456529053 | None | None | I |
A/W | 0.6812 | likely_pathogenic | 0.6861 | pathogenic | -1.013 | Destabilizing | 0.935 | D | 0.546 | neutral | None | None | None | None | I |
A/Y | 0.4236 | ambiguous | 0.3997 | ambiguous | -0.711 | Destabilizing | 0.555 | D | 0.429 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.