Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33429 | 100510;100511;100512 | chr2:178536462;178536461;178536460 | chr2:179401189;179401188;179401187 |
N2AB | 31788 | 95587;95588;95589 | chr2:178536462;178536461;178536460 | chr2:179401189;179401188;179401187 |
N2A | 30861 | 92806;92807;92808 | chr2:178536462;178536461;178536460 | chr2:179401189;179401188;179401187 |
N2B | 24364 | 73315;73316;73317 | chr2:178536462;178536461;178536460 | chr2:179401189;179401188;179401187 |
Novex-1 | 24489 | 73690;73691;73692 | chr2:178536462;178536461;178536460 | chr2:179401189;179401188;179401187 |
Novex-2 | 24556 | 73891;73892;73893 | chr2:178536462;178536461;178536460 | chr2:179401189;179401188;179401187 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs762983936 | -1.784 | 1.0 | N | 0.923 | 0.695 | 0.864991553704 | gnomAD-2.1.1 | 4.14E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.11E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9104 | likely_pathogenic | 0.9305 | pathogenic | -2.472 | Highly Destabilizing | 0.999 | D | 0.706 | prob.neutral | None | None | None | None | N |
L/C | 0.914 | likely_pathogenic | 0.91 | pathogenic | -1.698 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9998 | pathogenic | -3.198 | Highly Destabilizing | 1.0 | D | 0.926 | deleterious | None | None | None | None | N |
L/E | 0.9962 | likely_pathogenic | 0.9977 | pathogenic | -2.876 | Highly Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
L/F | 0.8146 | likely_pathogenic | 0.8372 | pathogenic | -1.538 | Destabilizing | 1.0 | D | 0.818 | deleterious | D | 0.524283333 | None | None | N |
L/G | 0.9915 | likely_pathogenic | 0.9943 | pathogenic | -3.047 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/H | 0.9939 | likely_pathogenic | 0.9963 | pathogenic | -2.916 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.524536823 | None | None | N |
L/I | 0.1212 | likely_benign | 0.1363 | benign | -0.727 | Destabilizing | 0.999 | D | 0.557 | neutral | N | 0.472895654 | None | None | N |
L/K | 0.9934 | likely_pathogenic | 0.9965 | pathogenic | -2.036 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/M | 0.4225 | ambiguous | 0.4161 | ambiguous | -0.935 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
L/N | 0.9976 | likely_pathogenic | 0.9986 | pathogenic | -2.828 | Highly Destabilizing | 1.0 | D | 0.925 | deleterious | None | None | None | None | N |
L/P | 0.9945 | likely_pathogenic | 0.9975 | pathogenic | -1.303 | Destabilizing | 1.0 | D | 0.923 | deleterious | N | 0.513180517 | None | None | N |
L/Q | 0.9872 | likely_pathogenic | 0.9923 | pathogenic | -2.38 | Highly Destabilizing | 1.0 | D | 0.926 | deleterious | None | None | None | None | N |
L/R | 0.9852 | likely_pathogenic | 0.9922 | pathogenic | -2.331 | Highly Destabilizing | 1.0 | D | 0.905 | deleterious | D | 0.524536823 | None | None | N |
L/S | 0.9903 | likely_pathogenic | 0.9943 | pathogenic | -3.259 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/T | 0.9194 | likely_pathogenic | 0.944 | pathogenic | -2.768 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
L/V | 0.1531 | likely_benign | 0.1608 | benign | -1.303 | Destabilizing | 0.999 | D | 0.573 | neutral | N | 0.43508384 | None | None | N |
L/W | 0.9846 | likely_pathogenic | 0.9898 | pathogenic | -1.833 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/Y | 0.9903 | likely_pathogenic | 0.993 | pathogenic | -1.689 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.