Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33462 | 100609;100610;100611 | chr2:178536363;178536362;178536361 | chr2:179401090;179401089;179401088 |
N2AB | 31821 | 95686;95687;95688 | chr2:178536363;178536362;178536361 | chr2:179401090;179401089;179401088 |
N2A | 30894 | 92905;92906;92907 | chr2:178536363;178536362;178536361 | chr2:179401090;179401089;179401088 |
N2B | 24397 | 73414;73415;73416 | chr2:178536363;178536362;178536361 | chr2:179401090;179401089;179401088 |
Novex-1 | 24522 | 73789;73790;73791 | chr2:178536363;178536362;178536361 | chr2:179401090;179401089;179401088 |
Novex-2 | 24589 | 73990;73991;73992 | chr2:178536363;178536362;178536361 | chr2:179401090;179401089;179401088 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.999 | N | 0.687 | 0.581 | 0.418718287753 | gnomAD-4.0.0 | 1.5915E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77316E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs748104690 | -0.719 | 0.999 | N | 0.601 | 0.385 | 0.385417323374 | gnomAD-2.1.1 | 3.22E-05 | None | None | None | None | N | None | 0 | 1.98345E-04 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
E/K | rs748104690 | -0.719 | 0.999 | N | 0.601 | 0.385 | 0.385417323374 | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | N | None | 0 | 3.92619E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs748104690 | -0.719 | 0.999 | N | 0.601 | 0.385 | 0.385417323374 | gnomAD-4.0.0 | 1.61127E-05 | None | None | None | None | N | None | 0 | 3.334E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 6.58834E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1783 | likely_benign | 0.1671 | benign | -0.775 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | N | 0.479650898 | None | None | N |
E/C | 0.8719 | likely_pathogenic | 0.8458 | pathogenic | -0.63 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
E/D | 0.2684 | likely_benign | 0.224 | benign | -1.537 | Destabilizing | 0.999 | D | 0.493 | neutral | N | 0.48473978 | None | None | N |
E/F | 0.9061 | likely_pathogenic | 0.885 | pathogenic | -0.12 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
E/G | 0.2896 | likely_benign | 0.3147 | benign | -1.214 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.487488484 | None | None | N |
E/H | 0.7381 | likely_pathogenic | 0.6905 | pathogenic | -0.571 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/I | 0.4901 | ambiguous | 0.4037 | ambiguous | 0.45 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/K | 0.3911 | ambiguous | 0.3913 | ambiguous | -1.182 | Destabilizing | 0.999 | D | 0.601 | neutral | N | 0.468241686 | None | None | N |
E/L | 0.6067 | likely_pathogenic | 0.546 | ambiguous | 0.45 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/M | 0.6518 | likely_pathogenic | 0.5923 | pathogenic | 0.966 | Stabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
E/N | 0.4744 | ambiguous | 0.4213 | ambiguous | -1.611 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/P | 0.5953 | likely_pathogenic | 0.6185 | pathogenic | 0.063 | Stabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
E/Q | 0.1976 | likely_benign | 0.1855 | benign | -1.361 | Destabilizing | 1.0 | D | 0.643 | neutral | N | 0.520463101 | None | None | N |
E/R | 0.544 | ambiguous | 0.5462 | ambiguous | -0.958 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
E/S | 0.2574 | likely_benign | 0.2416 | benign | -2.057 | Highly Destabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | N |
E/T | 0.2838 | likely_benign | 0.236 | benign | -1.683 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/V | 0.3006 | likely_benign | 0.2443 | benign | 0.063 | Stabilizing | 1.0 | D | 0.771 | deleterious | N | 0.476385668 | None | None | N |
E/W | 0.968 | likely_pathogenic | 0.9645 | pathogenic | -0.035 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
E/Y | 0.8586 | likely_pathogenic | 0.8358 | pathogenic | 0.079 | Stabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.