Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33472 | 100639;100640;100641 | chr2:178536333;178536332;178536331 | chr2:179401060;179401059;179401058 |
N2AB | 31831 | 95716;95717;95718 | chr2:178536333;178536332;178536331 | chr2:179401060;179401059;179401058 |
N2A | 30904 | 92935;92936;92937 | chr2:178536333;178536332;178536331 | chr2:179401060;179401059;179401058 |
N2B | 24407 | 73444;73445;73446 | chr2:178536333;178536332;178536331 | chr2:179401060;179401059;179401058 |
Novex-1 | 24532 | 73819;73820;73821 | chr2:178536333;178536332;178536331 | chr2:179401060;179401059;179401058 |
Novex-2 | 24599 | 74020;74021;74022 | chr2:178536333;178536332;178536331 | chr2:179401060;179401059;179401058 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | None | None | 0.999 | N | 0.63 | 0.524 | 0.720044110252 | gnomAD-4.0.0 | 1.59154E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85835E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2374 | likely_benign | 0.3062 | benign | -0.341 | Destabilizing | 0.997 | D | 0.571 | neutral | None | None | None | None | I |
L/C | 0.7755 | likely_pathogenic | 0.8034 | pathogenic | -0.67 | Destabilizing | 1.0 | D | 0.601 | neutral | None | None | None | None | I |
L/D | 0.7334 | likely_pathogenic | 0.816 | pathogenic | 0.041 | Stabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
L/E | 0.4644 | ambiguous | 0.586 | pathogenic | -0.06 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | I |
L/F | 0.2508 | likely_benign | 0.2919 | benign | -0.526 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | I |
L/G | 0.6735 | likely_pathogenic | 0.7431 | pathogenic | -0.447 | Destabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | I |
L/H | 0.4429 | ambiguous | 0.5367 | ambiguous | 0.126 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | I |
L/I | 0.0991 | likely_benign | 0.1187 | benign | -0.196 | Destabilizing | 0.992 | D | 0.389 | neutral | N | 0.439076656 | None | None | I |
L/K | 0.4658 | ambiguous | 0.5894 | pathogenic | -0.117 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | I |
L/M | 0.1642 | likely_benign | 0.1837 | benign | -0.351 | Destabilizing | 0.985 | D | 0.394 | neutral | None | None | None | None | I |
L/N | 0.4955 | ambiguous | 0.5947 | pathogenic | 0.03 | Stabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | I |
L/P | 0.4259 | ambiguous | 0.5043 | ambiguous | -0.215 | Destabilizing | 1.0 | D | 0.644 | neutral | N | 0.447965498 | None | None | I |
L/Q | 0.2728 | likely_benign | 0.3522 | ambiguous | -0.163 | Destabilizing | 0.999 | D | 0.643 | neutral | N | 0.457083626 | None | None | I |
L/R | 0.3828 | ambiguous | 0.4789 | ambiguous | 0.332 | Stabilizing | 0.999 | D | 0.63 | neutral | N | 0.445039836 | None | None | I |
L/S | 0.3494 | ambiguous | 0.4344 | ambiguous | -0.394 | Destabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | I |
L/T | 0.2425 | likely_benign | 0.3252 | benign | -0.388 | Destabilizing | 1.0 | D | 0.6 | neutral | None | None | None | None | I |
L/V | 0.1406 | likely_benign | 0.1607 | benign | -0.215 | Destabilizing | 0.992 | D | 0.438 | neutral | N | 0.449522936 | None | None | I |
L/W | 0.4542 | ambiguous | 0.504 | ambiguous | -0.546 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | I |
L/Y | 0.5419 | ambiguous | 0.6203 | pathogenic | -0.278 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.