Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3349 | 10270;10271;10272 | chr2:178764246;178764245;178764244 | chr2:179628973;179628972;179628971 |
N2AB | 3349 | 10270;10271;10272 | chr2:178764246;178764245;178764244 | chr2:179628973;179628972;179628971 |
N2A | 3349 | 10270;10271;10272 | chr2:178764246;178764245;178764244 | chr2:179628973;179628972;179628971 |
N2B | 3303 | 10132;10133;10134 | chr2:178764246;178764245;178764244 | chr2:179628973;179628972;179628971 |
Novex-1 | 3303 | 10132;10133;10134 | chr2:178764246;178764245;178764244 | chr2:179628973;179628972;179628971 |
Novex-2 | 3303 | 10132;10133;10134 | chr2:178764246;178764245;178764244 | chr2:179628973;179628972;179628971 |
Novex-3 | 3349 | 10270;10271;10272 | chr2:178764246;178764245;178764244 | chr2:179628973;179628972;179628971 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs777960129 | -0.815 | None | N | 0.101 | 0.064 | 0.180583059064 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.8E-06 | 0 |
T/A | rs777960129 | -0.815 | None | N | 0.101 | 0.064 | 0.180583059064 | gnomAD-4.0.0 | 7.52495E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99313E-06 | 0 | 1.65579E-05 |
T/I | rs727503678 | 0.098 | None | N | 0.224 | 0.114 | 0.348101942276 | gnomAD-2.1.1 | 1.52137E-04 | None | None | None | None | N | None | 0 | 1.21414E-03 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs727503678 | 0.098 | None | N | 0.224 | 0.114 | 0.348101942276 | gnomAD-3.1.2 | 7.23E-05 | None | None | None | None | N | None | 0 | 7.19707E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs727503678 | 0.098 | None | N | 0.224 | 0.114 | 0.348101942276 | gnomAD-4.0.0 | 3.59354E-05 | None | None | None | None | N | None | 0 | 9.49937E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60051E-05 |
T/N | rs727503678 | -0.738 | 0.029 | N | 0.272 | 0.107 | 0.316494231283 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.8E-06 | 0 |
T/N | rs727503678 | -0.738 | 0.029 | N | 0.272 | 0.107 | 0.316494231283 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/N | rs727503678 | -0.738 | 0.029 | N | 0.272 | 0.107 | 0.316494231283 | gnomAD-4.0.0 | 6.57013E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46977E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0873 | likely_benign | 0.0843 | benign | -0.725 | Destabilizing | None | N | 0.101 | neutral | N | 0.501573347 | None | None | N |
T/C | 0.5036 | ambiguous | 0.3978 | ambiguous | -0.527 | Destabilizing | 0.356 | N | 0.378 | neutral | None | None | None | None | N |
T/D | 0.3715 | ambiguous | 0.3232 | benign | -0.348 | Destabilizing | 0.038 | N | 0.387 | neutral | None | None | None | None | N |
T/E | 0.246 | likely_benign | 0.2462 | benign | -0.34 | Destabilizing | 0.038 | N | 0.325 | neutral | None | None | None | None | N |
T/F | 0.1898 | likely_benign | 0.1698 | benign | -0.666 | Destabilizing | 0.214 | N | 0.434 | neutral | None | None | None | None | N |
T/G | 0.3399 | likely_benign | 0.3035 | benign | -0.997 | Destabilizing | 0.016 | N | 0.361 | neutral | None | None | None | None | N |
T/H | 0.2245 | likely_benign | 0.1977 | benign | -1.224 | Destabilizing | 0.676 | D | 0.388 | neutral | None | None | None | None | N |
T/I | 0.1203 | likely_benign | 0.1217 | benign | -0.091 | Destabilizing | None | N | 0.224 | neutral | N | 0.512147944 | None | None | N |
T/K | 0.2158 | likely_benign | 0.2068 | benign | -0.892 | Destabilizing | 0.038 | N | 0.328 | neutral | None | None | None | None | N |
T/L | 0.0901 | likely_benign | 0.084 | benign | -0.091 | Destabilizing | 0.007 | N | 0.291 | neutral | None | None | None | None | N |
T/M | 0.0994 | likely_benign | 0.085 | benign | 0.067 | Stabilizing | 0.007 | N | 0.288 | neutral | None | None | None | None | N |
T/N | 0.1398 | likely_benign | 0.1171 | benign | -0.846 | Destabilizing | 0.029 | N | 0.272 | neutral | N | 0.514095914 | None | None | N |
T/P | 0.3268 | likely_benign | 0.3384 | benign | -0.27 | Destabilizing | 0.055 | N | 0.428 | neutral | D | 0.587072243 | None | None | N |
T/Q | 0.2027 | likely_benign | 0.1972 | benign | -0.97 | Destabilizing | 0.214 | N | 0.409 | neutral | None | None | None | None | N |
T/R | 0.1731 | likely_benign | 0.16 | benign | -0.634 | Destabilizing | 0.214 | N | 0.415 | neutral | None | None | None | None | N |
T/S | 0.1167 | likely_benign | 0.0978 | benign | -1.083 | Destabilizing | None | N | 0.112 | neutral | N | 0.493666121 | None | None | N |
T/V | 0.1158 | likely_benign | 0.1135 | benign | -0.27 | Destabilizing | None | N | 0.107 | neutral | None | None | None | None | N |
T/W | 0.599 | likely_pathogenic | 0.5154 | ambiguous | -0.638 | Destabilizing | 0.864 | D | 0.429 | neutral | None | None | None | None | N |
T/Y | 0.2472 | likely_benign | 0.2112 | benign | -0.419 | Destabilizing | 0.356 | N | 0.408 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.