Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33525 | 100798;100799;100800 | chr2:178536174;178536173;178536172 | chr2:179400901;179400900;179400899 |
N2AB | 31884 | 95875;95876;95877 | chr2:178536174;178536173;178536172 | chr2:179400901;179400900;179400899 |
N2A | 30957 | 93094;93095;93096 | chr2:178536174;178536173;178536172 | chr2:179400901;179400900;179400899 |
N2B | 24460 | 73603;73604;73605 | chr2:178536174;178536173;178536172 | chr2:179400901;179400900;179400899 |
Novex-1 | 24585 | 73978;73979;73980 | chr2:178536174;178536173;178536172 | chr2:179400901;179400900;179400899 |
Novex-2 | 24652 | 74179;74180;74181 | chr2:178536174;178536173;178536172 | chr2:179400901;179400900;179400899 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.992 | D | 0.765 | 0.664 | 0.629215704067 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92976E-04 | None | 0 | 0 | 0 | 0 | 0 |
P/S | None | None | 0.992 | D | 0.765 | 0.664 | 0.629215704067 | gnomAD-4.0.0 | 2.56307E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.42589E-05 | None | 0 | 0 | 0 | 1.34045E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.8439 | likely_pathogenic | 0.813 | pathogenic | -1.682 | Destabilizing | 0.915 | D | 0.647 | neutral | N | 0.513166605 | None | None | N |
P/C | 0.9872 | likely_pathogenic | 0.982 | pathogenic | -1.139 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
P/D | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -2.173 | Highly Destabilizing | 0.96 | D | 0.825 | deleterious | None | None | None | None | N |
P/E | 0.9986 | likely_pathogenic | 0.9983 | pathogenic | -2.163 | Highly Destabilizing | 0.975 | D | 0.819 | deleterious | None | None | None | None | N |
P/F | 0.9992 | likely_pathogenic | 0.9993 | pathogenic | -1.365 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
P/G | 0.9873 | likely_pathogenic | 0.9825 | pathogenic | -2.014 | Highly Destabilizing | 0.996 | D | 0.775 | deleterious | None | None | None | None | N |
P/H | 0.9982 | likely_pathogenic | 0.9978 | pathogenic | -1.682 | Destabilizing | 1.0 | D | 0.744 | deleterious | D | 0.537400153 | None | None | N |
P/I | 0.9858 | likely_pathogenic | 0.989 | pathogenic | -0.848 | Destabilizing | 0.999 | D | 0.829 | deleterious | None | None | None | None | N |
P/K | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -1.386 | Destabilizing | 0.999 | D | 0.826 | deleterious | None | None | None | None | N |
P/L | 0.9746 | likely_pathogenic | 0.9776 | pathogenic | -0.848 | Destabilizing | 0.998 | D | 0.808 | deleterious | D | 0.529367848 | None | None | N |
P/M | 0.9942 | likely_pathogenic | 0.9945 | pathogenic | -0.6 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
P/N | 0.9982 | likely_pathogenic | 0.9977 | pathogenic | -1.238 | Destabilizing | 0.993 | D | 0.814 | deleterious | None | None | None | None | N |
P/Q | 0.9974 | likely_pathogenic | 0.9968 | pathogenic | -1.43 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
P/R | 0.9979 | likely_pathogenic | 0.9974 | pathogenic | -0.885 | Destabilizing | 0.999 | D | 0.825 | deleterious | D | 0.56339122 | None | None | N |
P/S | 0.9856 | likely_pathogenic | 0.9806 | pathogenic | -1.676 | Destabilizing | 0.992 | D | 0.765 | deleterious | D | 0.551527935 | None | None | N |
P/T | 0.9769 | likely_pathogenic | 0.9742 | pathogenic | -1.567 | Destabilizing | 0.192 | N | 0.425 | neutral | D | 0.52865074 | None | None | N |
P/V | 0.9561 | likely_pathogenic | 0.9619 | pathogenic | -1.094 | Destabilizing | 0.991 | D | 0.775 | deleterious | None | None | None | None | N |
P/W | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -1.639 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
P/Y | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -1.343 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.