Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33526 | 100801;100802;100803 | chr2:178536171;178536170;178536169 | chr2:179400898;179400897;179400896 |
N2AB | 31885 | 95878;95879;95880 | chr2:178536171;178536170;178536169 | chr2:179400898;179400897;179400896 |
N2A | 30958 | 93097;93098;93099 | chr2:178536171;178536170;178536169 | chr2:179400898;179400897;179400896 |
N2B | 24461 | 73606;73607;73608 | chr2:178536171;178536170;178536169 | chr2:179400898;179400897;179400896 |
Novex-1 | 24586 | 73981;73982;73983 | chr2:178536171;178536170;178536169 | chr2:179400898;179400897;179400896 |
Novex-2 | 24653 | 74182;74183;74184 | chr2:178536171;178536170;178536169 | chr2:179400898;179400897;179400896 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.088 | N | 0.497 | 0.078 | 0.149567049428 | gnomAD-4.0.0 | 1.36866E-06 | None | None | None | None | I | None | 5.97693E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | None | None | None | N | 0.226 | 0.178 | 0.475971816791 | gnomAD-4.0.0 | 1.59176E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85904E-06 | 0 | 0 |
I/V | None | None | None | N | 0.129 | 0.108 | 0.141422826196 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2187 | likely_benign | 0.2255 | benign | -0.813 | Destabilizing | 0.011 | N | 0.349 | neutral | None | None | None | None | I |
I/C | 0.6889 | likely_pathogenic | 0.7397 | pathogenic | -0.533 | Destabilizing | 0.46 | N | 0.51 | neutral | None | None | None | None | I |
I/D | 0.6744 | likely_pathogenic | 0.7312 | pathogenic | -0.616 | Destabilizing | 0.107 | N | 0.587 | neutral | None | None | None | None | I |
I/E | 0.5552 | ambiguous | 0.5721 | pathogenic | -0.696 | Destabilizing | 0.081 | N | 0.571 | neutral | None | None | None | None | I |
I/F | 0.2302 | likely_benign | 0.2554 | benign | -0.735 | Destabilizing | 0.112 | N | 0.487 | neutral | N | 0.513798993 | None | None | I |
I/G | 0.6124 | likely_pathogenic | 0.6608 | pathogenic | -1.009 | Destabilizing | 0.107 | N | 0.519 | neutral | None | None | None | None | I |
I/H | 0.5238 | ambiguous | 0.5947 | pathogenic | -0.315 | Destabilizing | 0.802 | D | 0.517 | neutral | None | None | None | None | I |
I/K | 0.434 | ambiguous | 0.4614 | ambiguous | -0.581 | Destabilizing | 0.004 | N | 0.571 | neutral | None | None | None | None | I |
I/L | 0.1217 | likely_benign | 0.1286 | benign | -0.402 | Destabilizing | None | N | 0.121 | neutral | N | 0.451326382 | None | None | I |
I/M | 0.1008 | likely_benign | 0.1104 | benign | -0.404 | Destabilizing | 0.088 | N | 0.497 | neutral | N | 0.495039874 | None | None | I |
I/N | 0.2296 | likely_benign | 0.2595 | benign | -0.312 | Destabilizing | 0.241 | N | 0.577 | neutral | N | 0.452961178 | None | None | I |
I/P | 0.9233 | likely_pathogenic | 0.9275 | pathogenic | -0.506 | Destabilizing | 0.46 | N | 0.572 | neutral | None | None | None | None | I |
I/Q | 0.424 | ambiguous | 0.4573 | ambiguous | -0.553 | Destabilizing | 0.261 | N | 0.553 | neutral | None | None | None | None | I |
I/R | 0.3807 | ambiguous | 0.4214 | ambiguous | 0.025 | Stabilizing | 0.253 | N | 0.559 | neutral | None | None | None | None | I |
I/S | 0.2178 | likely_benign | 0.2384 | benign | -0.714 | Destabilizing | 0.004 | N | 0.323 | neutral | N | 0.433391195 | None | None | I |
I/T | 0.122 | likely_benign | 0.1299 | benign | -0.69 | Destabilizing | None | N | 0.226 | neutral | N | 0.402628358 | None | None | I |
I/V | 0.0561 | likely_benign | 0.0602 | benign | -0.506 | Destabilizing | None | N | 0.129 | neutral | N | 0.425217216 | None | None | I |
I/W | 0.8846 | likely_pathogenic | 0.9117 | pathogenic | -0.776 | Destabilizing | 0.936 | D | 0.544 | neutral | None | None | None | None | I |
I/Y | 0.6408 | likely_pathogenic | 0.6886 | pathogenic | -0.541 | Destabilizing | 0.038 | N | 0.544 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.