Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33544 | 100855;100856;100857 | chr2:178536117;178536116;178536115 | chr2:179400844;179400843;179400842 |
N2AB | 31903 | 95932;95933;95934 | chr2:178536117;178536116;178536115 | chr2:179400844;179400843;179400842 |
N2A | 30976 | 93151;93152;93153 | chr2:178536117;178536116;178536115 | chr2:179400844;179400843;179400842 |
N2B | 24479 | 73660;73661;73662 | chr2:178536117;178536116;178536115 | chr2:179400844;179400843;179400842 |
Novex-1 | 24604 | 74035;74036;74037 | chr2:178536117;178536116;178536115 | chr2:179400844;179400843;179400842 |
Novex-2 | 24671 | 74236;74237;74238 | chr2:178536117;178536116;178536115 | chr2:179400844;179400843;179400842 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.522 | N | 0.475 | 0.231 | 0.27855597813 | gnomAD-4.0.0 | 6.84408E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73551E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8453 | likely_pathogenic | 0.7531 | pathogenic | -0.912 | Destabilizing | 0.592 | D | 0.449 | neutral | None | None | None | None | I |
R/C | 0.5188 | ambiguous | 0.4103 | ambiguous | -0.886 | Destabilizing | 0.998 | D | 0.511 | neutral | None | None | None | None | I |
R/D | 0.9371 | likely_pathogenic | 0.874 | pathogenic | -0.11 | Destabilizing | 0.875 | D | 0.505 | neutral | None | None | None | None | I |
R/E | 0.7598 | likely_pathogenic | 0.6184 | pathogenic | -0.013 | Destabilizing | 0.303 | N | 0.402 | neutral | None | None | None | None | I |
R/F | 0.9393 | likely_pathogenic | 0.876 | pathogenic | -0.948 | Destabilizing | 0.984 | D | 0.53 | neutral | None | None | None | None | I |
R/G | 0.7533 | likely_pathogenic | 0.6298 | pathogenic | -1.182 | Destabilizing | 0.841 | D | 0.509 | neutral | D | 0.52434406 | None | None | I |
R/H | 0.2446 | likely_benign | 0.1774 | benign | -1.397 | Destabilizing | 0.954 | D | 0.506 | neutral | None | None | None | None | I |
R/I | 0.686 | likely_pathogenic | 0.5382 | ambiguous | -0.195 | Destabilizing | 0.954 | D | 0.527 | neutral | None | None | None | None | I |
R/K | 0.1519 | likely_benign | 0.1343 | benign | -0.882 | Destabilizing | None | N | 0.117 | neutral | N | 0.433220624 | None | None | I |
R/L | 0.7075 | likely_pathogenic | 0.5754 | pathogenic | -0.195 | Destabilizing | 0.744 | D | 0.509 | neutral | None | None | None | None | I |
R/M | 0.7425 | likely_pathogenic | 0.6184 | pathogenic | -0.39 | Destabilizing | 0.979 | D | 0.541 | neutral | N | 0.504142146 | None | None | I |
R/N | 0.8529 | likely_pathogenic | 0.7605 | pathogenic | -0.291 | Destabilizing | 0.875 | D | 0.435 | neutral | None | None | None | None | I |
R/P | 0.9863 | likely_pathogenic | 0.9763 | pathogenic | -0.414 | Destabilizing | 0.934 | D | 0.535 | neutral | None | None | None | None | I |
R/Q | 0.2092 | likely_benign | 0.1542 | benign | -0.563 | Destabilizing | 0.722 | D | 0.451 | neutral | None | None | None | None | I |
R/S | 0.8288 | likely_pathogenic | 0.722 | pathogenic | -1.119 | Destabilizing | 0.522 | D | 0.475 | neutral | N | 0.462812812 | None | None | I |
R/T | 0.619 | likely_pathogenic | 0.4638 | ambiguous | -0.854 | Destabilizing | 0.841 | D | 0.498 | neutral | N | 0.450923737 | None | None | I |
R/V | 0.749 | likely_pathogenic | 0.6266 | pathogenic | -0.414 | Destabilizing | 0.678 | D | 0.532 | neutral | None | None | None | None | I |
R/W | 0.7195 | likely_pathogenic | 0.5844 | pathogenic | -0.605 | Destabilizing | 0.998 | D | 0.531 | neutral | D | 0.537524001 | None | None | I |
R/Y | 0.8615 | likely_pathogenic | 0.7516 | pathogenic | -0.29 | Destabilizing | 0.984 | D | 0.527 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.