Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33552 | 100879;100880;100881 | chr2:178536093;178536092;178536091 | chr2:179400820;179400819;179400818 |
N2AB | 31911 | 95956;95957;95958 | chr2:178536093;178536092;178536091 | chr2:179400820;179400819;179400818 |
N2A | 30984 | 93175;93176;93177 | chr2:178536093;178536092;178536091 | chr2:179400820;179400819;179400818 |
N2B | 24487 | 73684;73685;73686 | chr2:178536093;178536092;178536091 | chr2:179400820;179400819;179400818 |
Novex-1 | 24612 | 74059;74060;74061 | chr2:178536093;178536092;178536091 | chr2:179400820;179400819;179400818 |
Novex-2 | 24679 | 74260;74261;74262 | chr2:178536093;178536092;178536091 | chr2:179400820;179400819;179400818 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs768683486 | -0.731 | 1.0 | D | 0.735 | 0.517 | 0.682531388322 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
Y/C | rs768683486 | -0.731 | 1.0 | D | 0.735 | 0.517 | 0.682531388322 | gnomAD-4.0.0 | 2.05619E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70299E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9879 | likely_pathogenic | 0.9567 | pathogenic | -2.395 | Highly Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
Y/C | 0.884 | likely_pathogenic | 0.6883 | pathogenic | -0.799 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | D | 0.526458859 | None | None | N |
Y/D | 0.9888 | likely_pathogenic | 0.9485 | pathogenic | -1.102 | Destabilizing | 1.0 | D | 0.784 | deleterious | N | 0.4813585 | None | None | N |
Y/E | 0.9968 | likely_pathogenic | 0.9822 | pathogenic | -1.024 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
Y/F | 0.3212 | likely_benign | 0.2123 | benign | -1.112 | Destabilizing | 0.996 | D | 0.503 | neutral | N | 0.486689749 | None | None | N |
Y/G | 0.977 | likely_pathogenic | 0.9398 | pathogenic | -2.715 | Highly Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
Y/H | 0.949 | likely_pathogenic | 0.8018 | pathogenic | -1.15 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | N | 0.507006306 | None | None | N |
Y/I | 0.9544 | likely_pathogenic | 0.8796 | pathogenic | -1.42 | Destabilizing | 0.997 | D | 0.785 | deleterious | None | None | None | None | N |
Y/K | 0.9936 | likely_pathogenic | 0.9742 | pathogenic | -1.095 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
Y/L | 0.924 | likely_pathogenic | 0.8447 | pathogenic | -1.42 | Destabilizing | 0.991 | D | 0.672 | neutral | None | None | None | None | N |
Y/M | 0.9745 | likely_pathogenic | 0.9251 | pathogenic | -0.93 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
Y/N | 0.9295 | likely_pathogenic | 0.7736 | pathogenic | -1.345 | Destabilizing | 1.0 | D | 0.772 | deleterious | N | 0.472200299 | None | None | N |
Y/P | 0.9974 | likely_pathogenic | 0.9928 | pathogenic | -1.741 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
Y/Q | 0.9934 | likely_pathogenic | 0.9634 | pathogenic | -1.324 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
Y/R | 0.9837 | likely_pathogenic | 0.9391 | pathogenic | -0.597 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
Y/S | 0.945 | likely_pathogenic | 0.8245 | pathogenic | -1.868 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.451921028 | None | None | N |
Y/T | 0.9798 | likely_pathogenic | 0.9245 | pathogenic | -1.696 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
Y/V | 0.9371 | likely_pathogenic | 0.8471 | pathogenic | -1.741 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
Y/W | 0.8743 | likely_pathogenic | 0.7409 | pathogenic | -0.713 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.