Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33556 | 100891;100892;100893 | chr2:178536081;178536080;178536079 | chr2:179400808;179400807;179400806 |
N2AB | 31915 | 95968;95969;95970 | chr2:178536081;178536080;178536079 | chr2:179400808;179400807;179400806 |
N2A | 30988 | 93187;93188;93189 | chr2:178536081;178536080;178536079 | chr2:179400808;179400807;179400806 |
N2B | 24491 | 73696;73697;73698 | chr2:178536081;178536080;178536079 | chr2:179400808;179400807;179400806 |
Novex-1 | 24616 | 74071;74072;74073 | chr2:178536081;178536080;178536079 | chr2:179400808;179400807;179400806 |
Novex-2 | 24683 | 74272;74273;74274 | chr2:178536081;178536080;178536079 | chr2:179400808;179400807;179400806 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | 0.006 | N | 0.447 | 0.202 | 0.346768085243 | gnomAD-4.0.0 | 1.68175E-05 | None | None | None | None | N | None | 6.34035E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.70755E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8124 | likely_pathogenic | 0.7407 | pathogenic | -2.384 | Highly Destabilizing | 0.592 | D | 0.466 | neutral | None | None | None | None | N |
I/C | 0.9034 | likely_pathogenic | 0.8778 | pathogenic | -1.71 | Destabilizing | 0.995 | D | 0.543 | neutral | None | None | None | None | N |
I/D | 0.9728 | likely_pathogenic | 0.9479 | pathogenic | -2.513 | Highly Destabilizing | 0.993 | D | 0.6 | neutral | None | None | None | None | N |
I/E | 0.9304 | likely_pathogenic | 0.8699 | pathogenic | -2.428 | Highly Destabilizing | 0.974 | D | 0.596 | neutral | None | None | None | None | N |
I/F | 0.533 | ambiguous | 0.4029 | ambiguous | -1.525 | Destabilizing | 0.881 | D | 0.507 | neutral | N | 0.472125729 | None | None | N |
I/G | 0.9599 | likely_pathogenic | 0.9365 | pathogenic | -2.796 | Highly Destabilizing | 0.934 | D | 0.586 | neutral | None | None | None | None | N |
I/H | 0.8795 | likely_pathogenic | 0.7812 | pathogenic | -2.012 | Highly Destabilizing | 0.996 | D | 0.621 | neutral | None | None | None | None | N |
I/K | 0.9055 | likely_pathogenic | 0.8194 | pathogenic | -1.866 | Destabilizing | 0.595 | D | 0.599 | neutral | None | None | None | None | N |
I/L | 0.2731 | likely_benign | 0.2412 | benign | -1.255 | Destabilizing | 0.006 | N | 0.447 | neutral | N | 0.449152868 | None | None | N |
I/M | 0.2347 | likely_benign | 0.1998 | benign | -1.121 | Destabilizing | 0.689 | D | 0.547 | neutral | N | 0.492405 | None | None | N |
I/N | 0.6863 | likely_pathogenic | 0.5911 | pathogenic | -1.861 | Destabilizing | 0.991 | D | 0.607 | neutral | N | 0.472645804 | None | None | N |
I/P | 0.9974 | likely_pathogenic | 0.9962 | pathogenic | -1.607 | Destabilizing | 0.993 | D | 0.607 | neutral | None | None | None | None | N |
I/Q | 0.8251 | likely_pathogenic | 0.7039 | pathogenic | -1.976 | Destabilizing | 0.984 | D | 0.612 | neutral | None | None | None | None | N |
I/R | 0.8683 | likely_pathogenic | 0.757 | pathogenic | -1.262 | Destabilizing | 0.952 | D | 0.607 | neutral | None | None | None | None | N |
I/S | 0.7347 | likely_pathogenic | 0.6334 | pathogenic | -2.487 | Highly Destabilizing | 0.841 | D | 0.541 | neutral | N | 0.477070188 | None | None | N |
I/T | 0.5451 | ambiguous | 0.4737 | ambiguous | -2.287 | Highly Destabilizing | 0.614 | D | 0.543 | neutral | N | 0.402839002 | None | None | N |
I/V | 0.1042 | likely_benign | 0.1186 | benign | -1.607 | Destabilizing | None | N | 0.269 | neutral | N | 0.401129635 | None | None | N |
I/W | 0.9671 | likely_pathogenic | 0.9373 | pathogenic | -1.72 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
I/Y | 0.8714 | likely_pathogenic | 0.7778 | pathogenic | -1.523 | Destabilizing | 0.699 | D | 0.545 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.