Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33569 | 100930;100931;100932 | chr2:178536042;178536041;178536040 | chr2:179400769;179400768;179400767 |
N2AB | 31928 | 96007;96008;96009 | chr2:178536042;178536041;178536040 | chr2:179400769;179400768;179400767 |
N2A | 31001 | 93226;93227;93228 | chr2:178536042;178536041;178536040 | chr2:179400769;179400768;179400767 |
N2B | 24504 | 73735;73736;73737 | chr2:178536042;178536041;178536040 | chr2:179400769;179400768;179400767 |
Novex-1 | 24629 | 74110;74111;74112 | chr2:178536042;178536041;178536040 | chr2:179400769;179400768;179400767 |
Novex-2 | 24696 | 74311;74312;74313 | chr2:178536042;178536041;178536040 | chr2:179400769;179400768;179400767 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs1289268364 | -1.436 | 1.0 | N | 0.707 | 0.401 | 0.442054744378 | gnomAD-2.1.1 | 8.6E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 7.61E-05 | None | 0 | 0 | 0 |
Q/H | rs1289268364 | -1.436 | 1.0 | N | 0.707 | 0.401 | 0.442054744378 | gnomAD-4.0.0 | 3.31873E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.05857E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.5545 | ambiguous | 0.4975 | ambiguous | -1.122 | Destabilizing | 0.999 | D | 0.541 | neutral | None | None | None | None | N |
Q/C | 0.9431 | likely_pathogenic | 0.9149 | pathogenic | -0.568 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
Q/D | 0.9583 | likely_pathogenic | 0.9048 | pathogenic | -1.187 | Destabilizing | 0.998 | D | 0.509 | neutral | None | None | None | None | N |
Q/E | 0.3259 | likely_benign | 0.2082 | benign | -0.977 | Destabilizing | 0.996 | D | 0.501 | neutral | N | 0.480838425 | None | None | N |
Q/F | 0.9628 | likely_pathogenic | 0.9367 | pathogenic | -0.711 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
Q/G | 0.8078 | likely_pathogenic | 0.7516 | pathogenic | -1.524 | Destabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | N |
Q/H | 0.7253 | likely_pathogenic | 0.5812 | pathogenic | -1.099 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | N | 0.488352583 | None | None | N |
Q/I | 0.7481 | likely_pathogenic | 0.6508 | pathogenic | -0.048 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
Q/K | 0.6113 | likely_pathogenic | 0.4036 | ambiguous | -0.261 | Destabilizing | 0.998 | D | 0.569 | neutral | N | 0.477222117 | None | None | N |
Q/L | 0.538 | ambiguous | 0.4137 | ambiguous | -0.048 | Destabilizing | 0.998 | D | 0.607 | neutral | N | 0.496656027 | None | None | N |
Q/M | 0.599 | likely_pathogenic | 0.5703 | pathogenic | 0.247 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
Q/N | 0.7497 | likely_pathogenic | 0.6646 | pathogenic | -0.988 | Destabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | N |
Q/P | 0.9944 | likely_pathogenic | 0.9855 | pathogenic | -0.379 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | N | 0.511318683 | None | None | N |
Q/R | 0.6297 | likely_pathogenic | 0.4206 | ambiguous | -0.295 | Destabilizing | 0.997 | D | 0.516 | neutral | N | 0.47539532 | None | None | N |
Q/S | 0.4723 | ambiguous | 0.4574 | ambiguous | -1.292 | Destabilizing | 0.999 | D | 0.511 | neutral | None | None | None | None | N |
Q/T | 0.3413 | ambiguous | 0.2897 | benign | -0.877 | Destabilizing | 0.996 | D | 0.607 | neutral | None | None | None | None | N |
Q/V | 0.5838 | likely_pathogenic | 0.4913 | ambiguous | -0.379 | Destabilizing | 0.999 | D | 0.658 | neutral | None | None | None | None | N |
Q/W | 0.9782 | likely_pathogenic | 0.9521 | pathogenic | -0.538 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
Q/Y | 0.942 | likely_pathogenic | 0.8879 | pathogenic | -0.244 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.