Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33600 | 101023;101024;101025 | chr2:178535817;178535816;178535815 | chr2:179400544;179400543;179400542 |
N2AB | 31959 | 96100;96101;96102 | chr2:178535817;178535816;178535815 | chr2:179400544;179400543;179400542 |
N2A | 31032 | 93319;93320;93321 | chr2:178535817;178535816;178535815 | chr2:179400544;179400543;179400542 |
N2B | 24535 | 73828;73829;73830 | chr2:178535817;178535816;178535815 | chr2:179400544;179400543;179400542 |
Novex-1 | 24660 | 74203;74204;74205 | chr2:178535817;178535816;178535815 | chr2:179400544;179400543;179400542 |
Novex-2 | 24727 | 74404;74405;74406 | chr2:178535817;178535816;178535815 | chr2:179400544;179400543;179400542 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.916 | N | 0.555 | 0.189 | 0.18995819373 | gnomAD-4.0.0 | 6.92294E-07 | None | None | None | None | I | None | 0 | 0 | None | 3.90046E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.226 | likely_benign | 0.221 | benign | -0.231 | Destabilizing | 0.921 | D | 0.553 | neutral | N | 0.468252264 | None | None | I |
E/C | 0.9472 | likely_pathogenic | 0.9293 | pathogenic | -0.045 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | I |
E/D | 0.2459 | likely_benign | 0.2196 | benign | -0.178 | Destabilizing | 0.384 | N | 0.541 | neutral | N | 0.44991722 | None | None | I |
E/F | 0.9376 | likely_pathogenic | 0.9167 | pathogenic | -0.115 | Destabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | I |
E/G | 0.3619 | ambiguous | 0.3065 | benign | -0.403 | Destabilizing | 0.987 | D | 0.641 | neutral | N | 0.449743861 | None | None | I |
E/H | 0.731 | likely_pathogenic | 0.689 | pathogenic | 0.233 | Stabilizing | 0.993 | D | 0.613 | neutral | None | None | None | None | I |
E/I | 0.628 | likely_pathogenic | 0.6158 | pathogenic | 0.181 | Stabilizing | 0.997 | D | 0.758 | deleterious | None | None | None | None | I |
E/K | 0.3775 | ambiguous | 0.3508 | ambiguous | 0.447 | Stabilizing | 0.916 | D | 0.555 | neutral | N | 0.404739504 | None | None | I |
E/L | 0.6212 | likely_pathogenic | 0.596 | pathogenic | 0.181 | Stabilizing | 0.979 | D | 0.705 | prob.neutral | None | None | None | None | I |
E/M | 0.7019 | likely_pathogenic | 0.6857 | pathogenic | 0.162 | Stabilizing | 0.995 | D | 0.726 | prob.delet. | None | None | None | None | I |
E/N | 0.493 | ambiguous | 0.4625 | ambiguous | 0.112 | Stabilizing | 0.978 | D | 0.587 | neutral | None | None | None | None | I |
E/P | 0.8677 | likely_pathogenic | 0.8207 | pathogenic | 0.064 | Stabilizing | 0.977 | D | 0.683 | prob.neutral | None | None | None | None | I |
E/Q | 0.2172 | likely_benign | 0.2161 | benign | 0.163 | Stabilizing | 0.376 | N | 0.255 | neutral | N | 0.396274736 | None | None | I |
E/R | 0.5366 | ambiguous | 0.4858 | ambiguous | 0.639 | Stabilizing | 0.966 | D | 0.569 | neutral | None | None | None | None | I |
E/S | 0.3306 | likely_benign | 0.3007 | benign | -0.036 | Destabilizing | 0.939 | D | 0.53 | neutral | None | None | None | None | I |
E/T | 0.368 | ambiguous | 0.3475 | ambiguous | 0.115 | Stabilizing | 0.977 | D | 0.621 | neutral | None | None | None | None | I |
E/V | 0.3822 | ambiguous | 0.3776 | ambiguous | 0.064 | Stabilizing | 0.981 | D | 0.677 | prob.neutral | N | 0.448530353 | None | None | I |
E/W | 0.9786 | likely_pathogenic | 0.9692 | pathogenic | 0.012 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
E/Y | 0.8769 | likely_pathogenic | 0.8364 | pathogenic | 0.124 | Stabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.