Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33607 | 101044;101045;101046 | chr2:178535796;178535795;178535794 | chr2:179400523;179400522;179400521 |
N2AB | 31966 | 96121;96122;96123 | chr2:178535796;178535795;178535794 | chr2:179400523;179400522;179400521 |
N2A | 31039 | 93340;93341;93342 | chr2:178535796;178535795;178535794 | chr2:179400523;179400522;179400521 |
N2B | 24542 | 73849;73850;73851 | chr2:178535796;178535795;178535794 | chr2:179400523;179400522;179400521 |
Novex-1 | 24667 | 74224;74225;74226 | chr2:178535796;178535795;178535794 | chr2:179400523;179400522;179400521 |
Novex-2 | 24734 | 74425;74426;74427 | chr2:178535796;178535795;178535794 | chr2:179400523;179400522;179400521 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 1.0 | N | 0.62 | 0.351 | 0.5630262602 | gnomAD-4.0.0 | 1.59605E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.91953E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6713 | likely_pathogenic | 0.515 | ambiguous | -0.912 | Destabilizing | 0.979 | D | 0.406 | neutral | None | None | None | None | N |
A/D | 0.9838 | likely_pathogenic | 0.957 | pathogenic | -1.732 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.517603014 | None | None | N |
A/E | 0.9733 | likely_pathogenic | 0.926 | pathogenic | -1.727 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
A/F | 0.9061 | likely_pathogenic | 0.8011 | pathogenic | -1.052 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
A/G | 0.3715 | ambiguous | 0.2916 | benign | -1.358 | Destabilizing | 0.994 | D | 0.594 | neutral | N | 0.493965351 | None | None | N |
A/H | 0.9627 | likely_pathogenic | 0.912 | pathogenic | -1.67 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
A/I | 0.7854 | likely_pathogenic | 0.6151 | pathogenic | -0.366 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
A/K | 0.9821 | likely_pathogenic | 0.9433 | pathogenic | -1.454 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
A/L | 0.7561 | likely_pathogenic | 0.5791 | pathogenic | -0.366 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
A/M | 0.8355 | likely_pathogenic | 0.6793 | pathogenic | -0.233 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
A/N | 0.9566 | likely_pathogenic | 0.8933 | pathogenic | -1.209 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
A/P | 0.9697 | likely_pathogenic | 0.9453 | pathogenic | -0.555 | Destabilizing | 1.0 | D | 0.743 | deleterious | N | 0.517349525 | None | None | N |
A/Q | 0.9435 | likely_pathogenic | 0.8627 | pathogenic | -1.326 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
A/R | 0.9511 | likely_pathogenic | 0.8756 | pathogenic | -1.129 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
A/S | 0.2945 | likely_benign | 0.2126 | benign | -1.522 | Destabilizing | 0.992 | D | 0.601 | neutral | N | 0.493711861 | None | None | N |
A/T | 0.4041 | ambiguous | 0.2518 | benign | -1.429 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.485949954 | None | None | N |
A/V | 0.4457 | ambiguous | 0.291 | benign | -0.555 | Destabilizing | 1.0 | D | 0.62 | neutral | N | 0.466906336 | None | None | N |
A/W | 0.9937 | likely_pathogenic | 0.9815 | pathogenic | -1.52 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
A/Y | 0.9636 | likely_pathogenic | 0.9144 | pathogenic | -1.101 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.