Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33626 | 101101;101102;101103 | chr2:178535739;178535738;178535737 | chr2:179400466;179400465;179400464 |
N2AB | 31985 | 96178;96179;96180 | chr2:178535739;178535738;178535737 | chr2:179400466;179400465;179400464 |
N2A | 31058 | 93397;93398;93399 | chr2:178535739;178535738;178535737 | chr2:179400466;179400465;179400464 |
N2B | 24561 | 73906;73907;73908 | chr2:178535739;178535738;178535737 | chr2:179400466;179400465;179400464 |
Novex-1 | 24686 | 74281;74282;74283 | chr2:178535739;178535738;178535737 | chr2:179400466;179400465;179400464 |
Novex-2 | 24753 | 74482;74483;74484 | chr2:178535739;178535738;178535737 | chr2:179400466;179400465;179400464 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1222398324 | None | 0.999 | N | 0.588 | 0.276 | 0.525561869914 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
V/M | rs1222398324 | None | 0.999 | N | 0.588 | 0.276 | 0.525561869914 | gnomAD-4.0.0 | 1.48744E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.03427E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6329 | likely_pathogenic | 0.3833 | ambiguous | -0.748 | Destabilizing | 0.271 | N | 0.216 | neutral | N | 0.474856603 | None | None | I |
V/C | 0.9566 | likely_pathogenic | 0.9278 | pathogenic | -0.618 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
V/D | 0.9256 | likely_pathogenic | 0.7984 | pathogenic | -0.795 | Destabilizing | 0.999 | D | 0.782 | deleterious | None | None | None | None | I |
V/E | 0.8395 | likely_pathogenic | 0.6453 | pathogenic | -0.885 | Destabilizing | 0.995 | D | 0.719 | prob.delet. | N | 0.462001949 | None | None | I |
V/F | 0.643 | likely_pathogenic | 0.4327 | ambiguous | -0.841 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
V/G | 0.8235 | likely_pathogenic | 0.6566 | pathogenic | -0.928 | Destabilizing | 0.995 | D | 0.676 | prob.neutral | N | 0.490808118 | None | None | I |
V/H | 0.9474 | likely_pathogenic | 0.8706 | pathogenic | -0.505 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
V/I | 0.1191 | likely_benign | 0.0975 | benign | -0.402 | Destabilizing | 0.919 | D | 0.462 | neutral | None | None | None | None | I |
V/K | 0.9068 | likely_pathogenic | 0.7763 | pathogenic | -0.769 | Destabilizing | 0.998 | D | 0.741 | deleterious | None | None | None | None | I |
V/L | 0.5106 | ambiguous | 0.334 | benign | -0.402 | Destabilizing | 0.809 | D | 0.46 | neutral | N | 0.520802323 | None | None | I |
V/M | 0.4334 | ambiguous | 0.2421 | benign | -0.392 | Destabilizing | 0.999 | D | 0.588 | neutral | N | 0.502835987 | None | None | I |
V/N | 0.7608 | likely_pathogenic | 0.5415 | ambiguous | -0.473 | Destabilizing | 0.996 | D | 0.788 | deleterious | None | None | None | None | I |
V/P | 0.9856 | likely_pathogenic | 0.9725 | pathogenic | -0.482 | Destabilizing | 0.988 | D | 0.777 | deleterious | None | None | None | None | I |
V/Q | 0.8059 | likely_pathogenic | 0.617 | pathogenic | -0.721 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | I |
V/R | 0.8883 | likely_pathogenic | 0.7712 | pathogenic | -0.191 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | I |
V/S | 0.6852 | likely_pathogenic | 0.4505 | ambiguous | -0.799 | Destabilizing | 0.978 | D | 0.637 | neutral | None | None | None | None | I |
V/T | 0.5679 | likely_pathogenic | 0.3513 | ambiguous | -0.792 | Destabilizing | 0.972 | D | 0.483 | neutral | None | None | None | None | I |
V/W | 0.991 | likely_pathogenic | 0.9798 | pathogenic | -0.958 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
V/Y | 0.9335 | likely_pathogenic | 0.8682 | pathogenic | -0.67 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.