Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33638 | 101137;101138;101139 | chr2:178535703;178535702;178535701 | chr2:179400430;179400429;179400428 |
N2AB | 31997 | 96214;96215;96216 | chr2:178535703;178535702;178535701 | chr2:179400430;179400429;179400428 |
N2A | 31070 | 93433;93434;93435 | chr2:178535703;178535702;178535701 | chr2:179400430;179400429;179400428 |
N2B | 24573 | 73942;73943;73944 | chr2:178535703;178535702;178535701 | chr2:179400430;179400429;179400428 |
Novex-1 | 24698 | 74317;74318;74319 | chr2:178535703;178535702;178535701 | chr2:179400430;179400429;179400428 |
Novex-2 | 24765 | 74518;74519;74520 | chr2:178535703;178535702;178535701 | chr2:179400430;179400429;179400428 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs760140582 | 0.054 | 0.864 | N | 0.372 | 0.166 | 0.176091768786 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 1.78E-05 | 0 |
N/S | rs760140582 | 0.054 | 0.864 | N | 0.372 | 0.166 | 0.176091768786 | gnomAD-4.0.0 | 9.548E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.42924E-05 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4865 | ambiguous | 0.2701 | benign | -0.397 | Destabilizing | 0.73 | D | 0.507 | neutral | None | None | None | None | N |
N/C | 0.5984 | likely_pathogenic | 0.3551 | ambiguous | 0.373 | Stabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
N/D | 0.4453 | ambiguous | 0.2291 | benign | -0.02 | Destabilizing | 0.926 | D | 0.423 | neutral | N | 0.476280755 | None | None | N |
N/E | 0.8328 | likely_pathogenic | 0.592 | pathogenic | -0.047 | Destabilizing | 0.982 | D | 0.465 | neutral | None | None | None | None | N |
N/F | 0.8965 | likely_pathogenic | 0.7474 | pathogenic | -0.713 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | N |
N/G | 0.4718 | ambiguous | 0.2929 | benign | -0.589 | Destabilizing | 0.993 | D | 0.401 | neutral | None | None | None | None | N |
N/H | 0.3519 | ambiguous | 0.1814 | benign | -0.649 | Destabilizing | 0.999 | D | 0.561 | neutral | N | 0.487618567 | None | None | N |
N/I | 0.6585 | likely_pathogenic | 0.3883 | ambiguous | 0.027 | Stabilizing | 0.995 | D | 0.673 | neutral | N | 0.484785595 | None | None | N |
N/K | 0.854 | likely_pathogenic | 0.5692 | pathogenic | 0.021 | Stabilizing | 0.994 | D | 0.476 | neutral | N | 0.494173082 | None | None | N |
N/L | 0.5805 | likely_pathogenic | 0.361 | ambiguous | 0.027 | Stabilizing | 0.993 | D | 0.609 | neutral | None | None | None | None | N |
N/M | 0.7204 | likely_pathogenic | 0.4836 | ambiguous | 0.43 | Stabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
N/P | 0.7276 | likely_pathogenic | 0.477 | ambiguous | -0.087 | Destabilizing | 0.992 | D | 0.628 | neutral | None | None | None | None | N |
N/Q | 0.7196 | likely_pathogenic | 0.4631 | ambiguous | -0.428 | Destabilizing | 0.998 | D | 0.54 | neutral | None | None | None | None | N |
N/R | 0.8156 | likely_pathogenic | 0.5632 | ambiguous | 0.063 | Stabilizing | 0.999 | D | 0.562 | neutral | None | None | None | None | N |
N/S | 0.1107 | likely_benign | 0.0751 | benign | -0.188 | Destabilizing | 0.864 | D | 0.372 | neutral | N | 0.424406353 | None | None | N |
N/T | 0.2562 | likely_benign | 0.1299 | benign | -0.069 | Destabilizing | 0.207 | N | 0.275 | neutral | N | 0.462196737 | None | None | N |
N/V | 0.597 | likely_pathogenic | 0.352 | ambiguous | -0.087 | Destabilizing | 0.919 | D | 0.642 | neutral | None | None | None | None | N |
N/W | 0.9594 | likely_pathogenic | 0.8918 | pathogenic | -0.676 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
N/Y | 0.5673 | likely_pathogenic | 0.342 | ambiguous | -0.424 | Destabilizing | 1.0 | D | 0.633 | neutral | N | 0.506950378 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.