Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33642 | 101149;101150;101151 | chr2:178535691;178535690;178535689 | chr2:179400418;179400417;179400416 |
N2AB | 32001 | 96226;96227;96228 | chr2:178535691;178535690;178535689 | chr2:179400418;179400417;179400416 |
N2A | 31074 | 93445;93446;93447 | chr2:178535691;178535690;178535689 | chr2:179400418;179400417;179400416 |
N2B | 24577 | 73954;73955;73956 | chr2:178535691;178535690;178535689 | chr2:179400418;179400417;179400416 |
Novex-1 | 24702 | 74329;74330;74331 | chr2:178535691;178535690;178535689 | chr2:179400418;179400417;179400416 |
Novex-2 | 24769 | 74530;74531;74532 | chr2:178535691;178535690;178535689 | chr2:179400418;179400417;179400416 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/D | rs774270109 | -3.443 | 1.0 | N | 0.776 | 0.622 | 0.813587418085 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
Y/D | rs774270109 | -3.443 | 1.0 | N | 0.776 | 0.622 | 0.813587418085 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
Y/D | rs774270109 | -3.443 | 1.0 | N | 0.776 | 0.622 | 0.813587418085 | gnomAD-4.0.0 | 3.09845E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.23808E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9014 | likely_pathogenic | 0.8323 | pathogenic | -2.758 | Highly Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
Y/C | 0.3918 | ambiguous | 0.226 | benign | -1.983 | Destabilizing | 1.0 | D | 0.772 | deleterious | N | 0.508675791 | None | None | N |
Y/D | 0.9369 | likely_pathogenic | 0.8852 | pathogenic | -2.766 | Highly Destabilizing | 1.0 | D | 0.776 | deleterious | N | 0.50918277 | None | None | N |
Y/E | 0.9745 | likely_pathogenic | 0.9457 | pathogenic | -2.578 | Highly Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | N |
Y/F | 0.2039 | likely_benign | 0.1716 | benign | -1.08 | Destabilizing | 0.994 | D | 0.53 | neutral | N | 0.483169441 | None | None | N |
Y/G | 0.8732 | likely_pathogenic | 0.8061 | pathogenic | -3.179 | Highly Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
Y/H | 0.5665 | likely_pathogenic | 0.3925 | ambiguous | -1.844 | Destabilizing | 0.401 | N | 0.363 | neutral | N | 0.474416672 | None | None | N |
Y/I | 0.8692 | likely_pathogenic | 0.7648 | pathogenic | -1.391 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
Y/K | 0.9536 | likely_pathogenic | 0.8996 | pathogenic | -2.162 | Highly Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
Y/L | 0.8124 | likely_pathogenic | 0.7279 | pathogenic | -1.391 | Destabilizing | 0.987 | D | 0.621 | neutral | None | None | None | None | N |
Y/M | 0.9189 | likely_pathogenic | 0.8633 | pathogenic | -1.243 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
Y/N | 0.7568 | likely_pathogenic | 0.6147 | pathogenic | -2.882 | Highly Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.497572975 | None | None | N |
Y/P | 0.9796 | likely_pathogenic | 0.9707 | pathogenic | -1.857 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
Y/Q | 0.9256 | likely_pathogenic | 0.8368 | pathogenic | -2.612 | Highly Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
Y/R | 0.8729 | likely_pathogenic | 0.7609 | pathogenic | -1.989 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
Y/S | 0.6913 | likely_pathogenic | 0.5492 | ambiguous | -3.315 | Highly Destabilizing | 1.0 | D | 0.677 | prob.neutral | N | 0.496812507 | None | None | N |
Y/T | 0.8476 | likely_pathogenic | 0.7447 | pathogenic | -2.998 | Highly Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
Y/V | 0.7646 | likely_pathogenic | 0.6627 | pathogenic | -1.857 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
Y/W | 0.6684 | likely_pathogenic | 0.6171 | pathogenic | -0.515 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.