Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33654 | 101185;101186;101187 | chr2:178535655;178535654;178535653 | chr2:179400382;179400381;179400380 |
N2AB | 32013 | 96262;96263;96264 | chr2:178535655;178535654;178535653 | chr2:179400382;179400381;179400380 |
N2A | 31086 | 93481;93482;93483 | chr2:178535655;178535654;178535653 | chr2:179400382;179400381;179400380 |
N2B | 24589 | 73990;73991;73992 | chr2:178535655;178535654;178535653 | chr2:179400382;179400381;179400380 |
Novex-1 | 24714 | 74365;74366;74367 | chr2:178535655;178535654;178535653 | chr2:179400382;179400381;179400380 |
Novex-2 | 24781 | 74566;74567;74568 | chr2:178535655;178535654;178535653 | chr2:179400382;179400381;179400380 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 1.0 | N | 0.542 | 0.501 | 0.618519337204 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8118 | likely_pathogenic | 0.6544 | pathogenic | -1.909 | Destabilizing | 1.0 | D | 0.542 | neutral | N | 0.491631039 | None | None | N |
V/C | 0.9472 | likely_pathogenic | 0.9076 | pathogenic | -1.539 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
V/D | 0.9686 | likely_pathogenic | 0.9119 | pathogenic | -2.116 | Highly Destabilizing | 1.0 | D | 0.786 | deleterious | N | 0.484251206 | None | None | N |
V/E | 0.9241 | likely_pathogenic | 0.7998 | pathogenic | -1.93 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/F | 0.7282 | likely_pathogenic | 0.5234 | ambiguous | -1.087 | Destabilizing | 1.0 | D | 0.769 | deleterious | N | 0.510201327 | None | None | N |
V/G | 0.8803 | likely_pathogenic | 0.7914 | pathogenic | -2.416 | Highly Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.511002741 | None | None | N |
V/H | 0.9626 | likely_pathogenic | 0.9108 | pathogenic | -2.081 | Highly Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
V/I | 0.1289 | likely_benign | 0.0995 | benign | -0.522 | Destabilizing | 0.995 | D | 0.478 | neutral | N | 0.511489406 | None | None | N |
V/K | 0.9549 | likely_pathogenic | 0.8796 | pathogenic | -1.616 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
V/L | 0.5438 | ambiguous | 0.3503 | ambiguous | -0.522 | Destabilizing | 0.995 | D | 0.524 | neutral | N | 0.473491166 | None | None | N |
V/M | 0.6105 | likely_pathogenic | 0.3967 | ambiguous | -0.642 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
V/N | 0.8857 | likely_pathogenic | 0.7753 | pathogenic | -1.819 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
V/P | 0.9964 | likely_pathogenic | 0.9941 | pathogenic | -0.955 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
V/Q | 0.8927 | likely_pathogenic | 0.7785 | pathogenic | -1.702 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
V/R | 0.9105 | likely_pathogenic | 0.813 | pathogenic | -1.41 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
V/S | 0.8096 | likely_pathogenic | 0.6781 | pathogenic | -2.479 | Highly Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/T | 0.6913 | likely_pathogenic | 0.5276 | ambiguous | -2.152 | Highly Destabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | N |
V/W | 0.9925 | likely_pathogenic | 0.9794 | pathogenic | -1.526 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
V/Y | 0.9422 | likely_pathogenic | 0.8809 | pathogenic | -1.152 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.