Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33664 | 101215;101216;101217 | chr2:178535625;178535624;178535623 | chr2:179400352;179400351;179400350 |
N2AB | 32023 | 96292;96293;96294 | chr2:178535625;178535624;178535623 | chr2:179400352;179400351;179400350 |
N2A | 31096 | 93511;93512;93513 | chr2:178535625;178535624;178535623 | chr2:179400352;179400351;179400350 |
N2B | 24599 | 74020;74021;74022 | chr2:178535625;178535624;178535623 | chr2:179400352;179400351;179400350 |
Novex-1 | 24724 | 74395;74396;74397 | chr2:178535625;178535624;178535623 | chr2:179400352;179400351;179400350 |
Novex-2 | 24791 | 74596;74597;74598 | chr2:178535625;178535624;178535623 | chr2:179400352;179400351;179400350 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | None | None | 0.946 | D | 0.66 | 0.394 | 0.577897453458 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7087 | likely_pathogenic | 0.626 | pathogenic | -0.982 | Destabilizing | 0.998 | D | 0.53 | neutral | None | None | None | None | N |
A/D | 0.8022 | likely_pathogenic | 0.6648 | pathogenic | -0.935 | Destabilizing | 0.946 | D | 0.66 | neutral | D | 0.523901343 | None | None | N |
A/E | 0.6885 | likely_pathogenic | 0.5217 | ambiguous | -0.985 | Destabilizing | 0.97 | D | 0.623 | neutral | None | None | None | None | N |
A/F | 0.8066 | likely_pathogenic | 0.6801 | pathogenic | -1.066 | Destabilizing | 0.998 | D | 0.762 | deleterious | None | None | None | None | N |
A/G | 0.2529 | likely_benign | 0.1937 | benign | -1.125 | Destabilizing | 0.002 | N | 0.271 | neutral | N | 0.488153974 | None | None | N |
A/H | 0.8129 | likely_pathogenic | 0.7152 | pathogenic | -1.174 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
A/I | 0.7309 | likely_pathogenic | 0.5827 | pathogenic | -0.431 | Destabilizing | 0.989 | D | 0.682 | prob.neutral | None | None | None | None | N |
A/K | 0.7913 | likely_pathogenic | 0.6354 | pathogenic | -1.161 | Destabilizing | 0.989 | D | 0.619 | neutral | None | None | None | None | N |
A/L | 0.58 | likely_pathogenic | 0.4715 | ambiguous | -0.431 | Destabilizing | 0.961 | D | 0.586 | neutral | None | None | None | None | N |
A/M | 0.5578 | ambiguous | 0.4334 | ambiguous | -0.368 | Destabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
A/N | 0.5918 | likely_pathogenic | 0.4741 | ambiguous | -0.905 | Destabilizing | 0.73 | D | 0.665 | neutral | None | None | None | None | N |
A/P | 0.9434 | likely_pathogenic | 0.8959 | pathogenic | -0.545 | Destabilizing | 0.972 | D | 0.681 | prob.neutral | N | 0.506522971 | None | None | N |
A/Q | 0.6156 | likely_pathogenic | 0.5073 | ambiguous | -1.081 | Destabilizing | 0.994 | D | 0.693 | prob.neutral | None | None | None | None | N |
A/R | 0.6652 | likely_pathogenic | 0.5112 | ambiguous | -0.766 | Destabilizing | 0.994 | D | 0.688 | prob.neutral | None | None | None | None | N |
A/S | 0.1189 | likely_benign | 0.1015 | benign | -1.282 | Destabilizing | 0.014 | N | 0.241 | neutral | N | 0.432316547 | None | None | N |
A/T | 0.1625 | likely_benign | 0.1131 | benign | -1.234 | Destabilizing | 0.092 | N | 0.299 | neutral | N | 0.476955545 | None | None | N |
A/V | 0.4278 | ambiguous | 0.3038 | benign | -0.545 | Destabilizing | 0.874 | D | 0.493 | neutral | N | 0.516263295 | None | None | N |
A/W | 0.9699 | likely_pathogenic | 0.9384 | pathogenic | -1.345 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
A/Y | 0.8818 | likely_pathogenic | 0.7904 | pathogenic | -0.958 | Destabilizing | 0.998 | D | 0.752 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.