Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33699 | 101320;101321;101322 | chr2:178535520;178535519;178535518 | chr2:179400247;179400246;179400245 |
N2AB | 32058 | 96397;96398;96399 | chr2:178535520;178535519;178535518 | chr2:179400247;179400246;179400245 |
N2A | 31131 | 93616;93617;93618 | chr2:178535520;178535519;178535518 | chr2:179400247;179400246;179400245 |
N2B | 24634 | 74125;74126;74127 | chr2:178535520;178535519;178535518 | chr2:179400247;179400246;179400245 |
Novex-1 | 24759 | 74500;74501;74502 | chr2:178535520;178535519;178535518 | chr2:179400247;179400246;179400245 |
Novex-2 | 24826 | 74701;74702;74703 | chr2:178535520;178535519;178535518 | chr2:179400247;179400246;179400245 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs1691031638 | None | 0.004 | N | 0.195 | 0.072 | 0.17258766438 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.099 | likely_benign | 0.109 | benign | -0.495 | Destabilizing | 0.099 | N | 0.369 | neutral | None | None | None | None | N |
S/C | 0.1498 | likely_benign | 0.1671 | benign | -0.386 | Destabilizing | 0.998 | D | 0.613 | neutral | N | 0.491669221 | None | None | N |
S/D | 0.5568 | ambiguous | 0.5761 | pathogenic | -0.105 | Destabilizing | 0.878 | D | 0.497 | neutral | None | None | None | None | N |
S/E | 0.6303 | likely_pathogenic | 0.6099 | pathogenic | -0.172 | Destabilizing | 0.909 | D | 0.513 | neutral | None | None | None | None | N |
S/F | 0.2535 | likely_benign | 0.2955 | benign | -0.956 | Destabilizing | 0.995 | D | 0.693 | prob.neutral | None | None | None | None | N |
S/G | 0.1422 | likely_benign | 0.1539 | benign | -0.66 | Destabilizing | 0.91 | D | 0.457 | neutral | N | 0.475362165 | None | None | N |
S/H | 0.5022 | ambiguous | 0.5071 | ambiguous | -1.214 | Destabilizing | 1.0 | D | 0.61 | neutral | None | None | None | None | N |
S/I | 0.2464 | likely_benign | 0.2474 | benign | -0.185 | Destabilizing | 0.986 | D | 0.675 | prob.neutral | N | 0.492124494 | None | None | N |
S/K | 0.8123 | likely_pathogenic | 0.7987 | pathogenic | -0.664 | Destabilizing | 0.964 | D | 0.505 | neutral | None | None | None | None | N |
S/L | 0.1243 | likely_benign | 0.1474 | benign | -0.185 | Destabilizing | 0.931 | D | 0.568 | neutral | None | None | None | None | N |
S/M | 0.2153 | likely_benign | 0.2444 | benign | 0.094 | Stabilizing | 1.0 | D | 0.608 | neutral | None | None | None | None | N |
S/N | 0.1956 | likely_benign | 0.2101 | benign | -0.479 | Destabilizing | 0.388 | N | 0.524 | neutral | N | 0.472551008 | None | None | N |
S/P | 0.9248 | likely_pathogenic | 0.915 | pathogenic | -0.257 | Destabilizing | 0.981 | D | 0.629 | neutral | None | None | None | None | N |
S/Q | 0.6271 | likely_pathogenic | 0.6117 | pathogenic | -0.708 | Destabilizing | 0.995 | D | 0.557 | neutral | None | None | None | None | N |
S/R | 0.7335 | likely_pathogenic | 0.7108 | pathogenic | -0.467 | Destabilizing | 0.993 | D | 0.639 | neutral | N | 0.472689139 | None | None | N |
S/T | 0.0691 | likely_benign | 0.0739 | benign | -0.528 | Destabilizing | 0.004 | N | 0.195 | neutral | N | 0.476037533 | None | None | N |
S/V | 0.2269 | likely_benign | 0.2356 | benign | -0.257 | Destabilizing | 0.834 | D | 0.549 | neutral | None | None | None | None | N |
S/W | 0.4707 | ambiguous | 0.493 | ambiguous | -0.949 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
S/Y | 0.3063 | likely_benign | 0.323 | benign | -0.682 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.