Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33722 | 101389;101390;101391 | chr2:178535451;178535450;178535449 | chr2:179400178;179400177;179400176 |
N2AB | 32081 | 96466;96467;96468 | chr2:178535451;178535450;178535449 | chr2:179400178;179400177;179400176 |
N2A | 31154 | 93685;93686;93687 | chr2:178535451;178535450;178535449 | chr2:179400178;179400177;179400176 |
N2B | 24657 | 74194;74195;74196 | chr2:178535451;178535450;178535449 | chr2:179400178;179400177;179400176 |
Novex-1 | 24782 | 74569;74570;74571 | chr2:178535451;178535450;178535449 | chr2:179400178;179400177;179400176 |
Novex-2 | 24849 | 74770;74771;74772 | chr2:178535451;178535450;178535449 | chr2:179400178;179400177;179400176 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1372744849 | None | 0.017 | N | 0.151 | 0.175 | 0.245660935333 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1372744849 | None | 0.017 | N | 0.151 | 0.175 | 0.245660935333 | gnomAD-4.0.0 | 2.56195E-06 | None | None | None | None | N | None | 1.69142E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 2.84398E-05 |
T/S | None | None | 0.646 | N | 0.459 | 0.302 | 0.219573609325 | gnomAD-4.0.0 | 3.18234E-06 | None | None | None | None | N | None | 0 | 4.57373E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1489 | likely_benign | 0.1748 | benign | -0.744 | Destabilizing | 0.271 | N | 0.431 | neutral | N | 0.499680937 | None | None | N |
T/C | 0.5342 | ambiguous | 0.5969 | pathogenic | -0.481 | Destabilizing | 0.999 | D | 0.543 | neutral | None | None | None | None | N |
T/D | 0.6268 | likely_pathogenic | 0.6922 | pathogenic | -0.408 | Destabilizing | 0.988 | D | 0.503 | neutral | None | None | None | None | N |
T/E | 0.4277 | ambiguous | 0.5058 | ambiguous | -0.424 | Destabilizing | 0.996 | D | 0.497 | neutral | None | None | None | None | N |
T/F | 0.4144 | ambiguous | 0.4638 | ambiguous | -0.85 | Destabilizing | 0.994 | D | 0.596 | neutral | None | None | None | None | N |
T/G | 0.4278 | ambiguous | 0.4555 | ambiguous | -0.986 | Destabilizing | 0.999 | D | 0.493 | neutral | None | None | None | None | N |
T/H | 0.4003 | ambiguous | 0.4537 | ambiguous | -1.314 | Destabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | N |
T/I | 0.1462 | likely_benign | 0.2032 | benign | -0.196 | Destabilizing | 0.017 | N | 0.151 | neutral | N | 0.488700186 | None | None | N |
T/K | 0.2893 | likely_benign | 0.3459 | ambiguous | -0.818 | Destabilizing | 0.992 | D | 0.501 | neutral | None | None | None | None | N |
T/L | 0.1241 | likely_benign | 0.1571 | benign | -0.196 | Destabilizing | 0.779 | D | 0.417 | neutral | None | None | None | None | N |
T/M | 0.1244 | likely_benign | 0.1515 | benign | 0.153 | Stabilizing | 0.984 | D | 0.558 | neutral | None | None | None | None | N |
T/N | 0.1943 | likely_benign | 0.2318 | benign | -0.71 | Destabilizing | 0.984 | D | 0.511 | neutral | N | 0.491794125 | None | None | N |
T/P | 0.6368 | likely_pathogenic | 0.693 | pathogenic | -0.347 | Destabilizing | 0.984 | D | 0.553 | neutral | N | 0.519559619 | None | None | N |
T/Q | 0.2909 | likely_benign | 0.3432 | ambiguous | -0.927 | Destabilizing | 0.994 | D | 0.555 | neutral | None | None | None | None | N |
T/R | 0.2319 | likely_benign | 0.2661 | benign | -0.542 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
T/S | 0.1834 | likely_benign | 0.1978 | benign | -0.948 | Destabilizing | 0.646 | D | 0.459 | neutral | N | 0.519983099 | None | None | N |
T/V | 0.1473 | likely_benign | 0.1883 | benign | -0.347 | Destabilizing | 0.525 | D | 0.325 | neutral | None | None | None | None | N |
T/W | 0.7592 | likely_pathogenic | 0.807 | pathogenic | -0.785 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
T/Y | 0.4895 | ambiguous | 0.5708 | pathogenic | -0.562 | Destabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.