Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3373 | 10342;10343;10344 | chr2:178759170;178759169;178759168 | chr2:179623897;179623896;179623895 |
N2AB | 3373 | 10342;10343;10344 | chr2:178759170;178759169;178759168 | chr2:179623897;179623896;179623895 |
N2A | 3373 | 10342;10343;10344 | chr2:178759170;178759169;178759168 | chr2:179623897;179623896;179623895 |
N2B | 3327 | 10204;10205;10206 | chr2:178759170;178759169;178759168 | chr2:179623897;179623896;179623895 |
Novex-1 | 3327 | 10204;10205;10206 | chr2:178759170;178759169;178759168 | chr2:179623897;179623896;179623895 |
Novex-2 | 3327 | 10204;10205;10206 | chr2:178759170;178759169;178759168 | chr2:179623897;179623896;179623895 |
Novex-3 | 3373 | 10342;10343;10344 | chr2:178759170;178759169;178759168 | chr2:179623897;179623896;179623895 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | N | 0.744 | 0.627 | 0.798287381842 | gnomAD-4.0.0 | 1.36831E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79872E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7423 | likely_pathogenic | 0.7439 | pathogenic | -2.034 | Highly Destabilizing | 0.997 | D | 0.49 | neutral | None | None | None | None | I |
L/C | 0.8732 | likely_pathogenic | 0.8453 | pathogenic | -1.466 | Destabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | I |
L/D | 0.984 | likely_pathogenic | 0.9828 | pathogenic | -1.341 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
L/E | 0.9096 | likely_pathogenic | 0.8908 | pathogenic | -1.288 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
L/F | 0.5193 | ambiguous | 0.5408 | ambiguous | -1.442 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
L/G | 0.9313 | likely_pathogenic | 0.9271 | pathogenic | -2.421 | Highly Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
L/H | 0.8825 | likely_pathogenic | 0.8548 | pathogenic | -1.644 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
L/I | 0.1471 | likely_benign | 0.1416 | benign | -1.009 | Destabilizing | 0.981 | D | 0.497 | neutral | N | 0.516666753 | None | None | I |
L/K | 0.8683 | likely_pathogenic | 0.8352 | pathogenic | -1.33 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
L/M | 0.2077 | likely_benign | 0.1873 | benign | -0.887 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | I |
L/N | 0.9116 | likely_pathogenic | 0.8998 | pathogenic | -1.209 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
L/P | 0.6785 | likely_pathogenic | 0.7303 | pathogenic | -1.321 | Destabilizing | 1.0 | D | 0.744 | deleterious | N | 0.383085287 | None | None | I |
L/Q | 0.738 | likely_pathogenic | 0.6733 | pathogenic | -1.334 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | D | 0.558899366 | None | None | I |
L/R | 0.8102 | likely_pathogenic | 0.7745 | pathogenic | -0.821 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.514231533 | None | None | I |
L/S | 0.8813 | likely_pathogenic | 0.8547 | pathogenic | -1.947 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
L/T | 0.6645 | likely_pathogenic | 0.6379 | pathogenic | -1.76 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | I |
L/V | 0.1736 | likely_benign | 0.1561 | benign | -1.321 | Destabilizing | 0.767 | D | 0.187 | neutral | N | 0.496806453 | None | None | I |
L/W | 0.8165 | likely_pathogenic | 0.8044 | pathogenic | -1.512 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
L/Y | 0.9067 | likely_pathogenic | 0.8939 | pathogenic | -1.285 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.