Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33733 | 101422;101423;101424 | chr2:178535418;178535417;178535416 | chr2:179400145;179400144;179400143 |
N2AB | 32092 | 96499;96500;96501 | chr2:178535418;178535417;178535416 | chr2:179400145;179400144;179400143 |
N2A | 31165 | 93718;93719;93720 | chr2:178535418;178535417;178535416 | chr2:179400145;179400144;179400143 |
N2B | 24668 | 74227;74228;74229 | chr2:178535418;178535417;178535416 | chr2:179400145;179400144;179400143 |
Novex-1 | 24793 | 74602;74603;74604 | chr2:178535418;178535417;178535416 | chr2:179400145;179400144;179400143 |
Novex-2 | 24860 | 74803;74804;74805 | chr2:178535418;178535417;178535416 | chr2:179400145;179400144;179400143 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.883 | N | 0.387 | 0.205 | 0.371344866733 | gnomAD-4.0.0 | 3.18238E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88352E-05 | 0 | 2.85807E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7725 | likely_pathogenic | 0.6811 | pathogenic | -0.658 | Destabilizing | 0.998 | D | 0.433 | neutral | None | None | None | None | N |
A/D | 0.8559 | likely_pathogenic | 0.6984 | pathogenic | -0.585 | Destabilizing | 0.962 | D | 0.453 | neutral | None | None | None | None | N |
A/E | 0.809 | likely_pathogenic | 0.619 | pathogenic | -0.754 | Destabilizing | 0.964 | D | 0.399 | neutral | N | 0.433745407 | None | None | N |
A/F | 0.841 | likely_pathogenic | 0.7179 | pathogenic | -0.945 | Destabilizing | 0.998 | D | 0.519 | neutral | None | None | None | None | N |
A/G | 0.2065 | likely_benign | 0.1879 | benign | -0.154 | Destabilizing | 0.002 | N | 0.241 | neutral | N | 0.388415762 | None | None | N |
A/H | 0.8789 | likely_pathogenic | 0.7975 | pathogenic | -0.283 | Destabilizing | 1.0 | D | 0.535 | neutral | None | None | None | None | N |
A/I | 0.8212 | likely_pathogenic | 0.6616 | pathogenic | -0.348 | Destabilizing | 0.995 | D | 0.415 | neutral | None | None | None | None | N |
A/K | 0.9318 | likely_pathogenic | 0.8489 | pathogenic | -0.487 | Destabilizing | 0.989 | D | 0.403 | neutral | None | None | None | None | N |
A/L | 0.5731 | likely_pathogenic | 0.4098 | ambiguous | -0.348 | Destabilizing | 0.964 | D | 0.413 | neutral | None | None | None | None | N |
A/M | 0.6409 | likely_pathogenic | 0.473 | ambiguous | -0.362 | Destabilizing | 1.0 | D | 0.465 | neutral | None | None | None | None | N |
A/N | 0.6475 | likely_pathogenic | 0.4919 | ambiguous | -0.137 | Destabilizing | 0.747 | D | 0.492 | neutral | None | None | None | None | N |
A/P | 0.9036 | likely_pathogenic | 0.835 | pathogenic | -0.255 | Destabilizing | 0.975 | D | 0.421 | neutral | N | 0.41354628 | None | None | N |
A/Q | 0.7282 | likely_pathogenic | 0.6032 | pathogenic | -0.444 | Destabilizing | 0.995 | D | 0.413 | neutral | None | None | None | None | N |
A/R | 0.8739 | likely_pathogenic | 0.7714 | pathogenic | -0.042 | Destabilizing | 0.989 | D | 0.415 | neutral | None | None | None | None | N |
A/S | 0.11 | likely_benign | 0.0938 | benign | -0.269 | Destabilizing | 0.005 | N | 0.249 | neutral | N | 0.367309771 | None | None | N |
A/T | 0.2433 | likely_benign | 0.148 | benign | -0.372 | Destabilizing | 0.64 | D | 0.347 | neutral | N | 0.402923854 | None | None | N |
A/V | 0.5084 | ambiguous | 0.3301 | benign | -0.255 | Destabilizing | 0.883 | D | 0.387 | neutral | N | 0.463108309 | None | None | N |
A/W | 0.9707 | likely_pathogenic | 0.938 | pathogenic | -1.07 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
A/Y | 0.9069 | likely_pathogenic | 0.8175 | pathogenic | -0.723 | Destabilizing | 0.998 | D | 0.524 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.