Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3374 | 10345;10346;10347 | chr2:178759167;178759166;178759165 | chr2:179623894;179623893;179623892 |
N2AB | 3374 | 10345;10346;10347 | chr2:178759167;178759166;178759165 | chr2:179623894;179623893;179623892 |
N2A | 3374 | 10345;10346;10347 | chr2:178759167;178759166;178759165 | chr2:179623894;179623893;179623892 |
N2B | 3328 | 10207;10208;10209 | chr2:178759167;178759166;178759165 | chr2:179623894;179623893;179623892 |
Novex-1 | 3328 | 10207;10208;10209 | chr2:178759167;178759166;178759165 | chr2:179623894;179623893;179623892 |
Novex-2 | 3328 | 10207;10208;10209 | chr2:178759167;178759166;178759165 | chr2:179623894;179623893;179623892 |
Novex-3 | 3374 | 10345;10346;10347 | chr2:178759167;178759166;178759165 | chr2:179623894;179623893;179623892 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs770029258 | -0.77 | 0.103 | N | 0.411 | 0.244 | 0.276898752692 | gnomAD-2.1.1 | 4E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
K/E | rs770029258 | -0.77 | 0.103 | N | 0.411 | 0.244 | 0.276898752692 | gnomAD-4.0.0 | 6.15742E-06 | None | None | None | None | N | None | 0 | 2.23634E-05 | None | 0 | 0 | None | 0 | 0 | 7.19488E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3567 | ambiguous | 0.2787 | benign | -0.015 | Destabilizing | 0.702 | D | 0.593 | neutral | None | None | None | None | N |
K/C | 0.8258 | likely_pathogenic | 0.7538 | pathogenic | -0.296 | Destabilizing | 0.999 | D | 0.704 | prob.neutral | None | None | None | None | N |
K/D | 0.57 | likely_pathogenic | 0.4991 | ambiguous | 0.195 | Stabilizing | 0.851 | D | 0.633 | neutral | None | None | None | None | N |
K/E | 0.1653 | likely_benign | 0.1466 | benign | 0.196 | Stabilizing | 0.103 | N | 0.411 | neutral | N | 0.503033841 | None | None | N |
K/F | 0.8272 | likely_pathogenic | 0.7583 | pathogenic | -0.28 | Destabilizing | 0.988 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/G | 0.6079 | likely_pathogenic | 0.5124 | ambiguous | -0.195 | Destabilizing | 0.919 | D | 0.643 | neutral | None | None | None | None | N |
K/H | 0.2923 | likely_benign | 0.2636 | benign | -0.458 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
K/I | 0.3936 | ambiguous | 0.3241 | benign | 0.374 | Stabilizing | 0.968 | D | 0.711 | prob.delet. | D | 0.532260444 | None | None | N |
K/L | 0.3785 | ambiguous | 0.3101 | benign | 0.374 | Stabilizing | 0.851 | D | 0.643 | neutral | None | None | None | None | N |
K/M | 0.2601 | likely_benign | 0.2012 | benign | 0.191 | Stabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | N |
K/N | 0.3755 | ambiguous | 0.3194 | benign | 0.207 | Stabilizing | 0.896 | D | 0.621 | neutral | N | 0.511636613 | None | None | N |
K/P | 0.8579 | likely_pathogenic | 0.7715 | pathogenic | 0.271 | Stabilizing | 0.988 | D | 0.632 | neutral | None | None | None | None | N |
K/Q | 0.1222 | likely_benign | 0.1133 | benign | 0.025 | Stabilizing | 0.968 | D | 0.604 | neutral | N | 0.496037553 | None | None | N |
K/R | 0.1042 | likely_benign | 0.0922 | benign | -0.008 | Destabilizing | 0.059 | N | 0.391 | neutral | N | 0.512322306 | None | None | N |
K/S | 0.3851 | ambiguous | 0.3167 | benign | -0.314 | Destabilizing | 0.851 | D | 0.579 | neutral | None | None | None | None | N |
K/T | 0.1475 | likely_benign | 0.1117 | benign | -0.167 | Destabilizing | 0.026 | N | 0.374 | neutral | N | 0.488455317 | None | None | N |
K/V | 0.3628 | ambiguous | 0.3011 | benign | 0.271 | Stabilizing | 0.851 | D | 0.639 | neutral | None | None | None | None | N |
K/W | 0.8393 | likely_pathogenic | 0.7683 | pathogenic | -0.284 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
K/Y | 0.7213 | likely_pathogenic | 0.6542 | pathogenic | 0.082 | Stabilizing | 0.996 | D | 0.675 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.