Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33746 | 101461;101462;101463 | chr2:178535379;178535378;178535377 | chr2:179400106;179400105;179400104 |
N2AB | 32105 | 96538;96539;96540 | chr2:178535379;178535378;178535377 | chr2:179400106;179400105;179400104 |
N2A | 31178 | 93757;93758;93759 | chr2:178535379;178535378;178535377 | chr2:179400106;179400105;179400104 |
N2B | 24681 | 74266;74267;74268 | chr2:178535379;178535378;178535377 | chr2:179400106;179400105;179400104 |
Novex-1 | 24806 | 74641;74642;74643 | chr2:178535379;178535378;178535377 | chr2:179400106;179400105;179400104 |
Novex-2 | 24873 | 74842;74843;74844 | chr2:178535379;178535378;178535377 | chr2:179400106;179400105;179400104 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs199594729 | -0.478 | 1.0 | N | 0.532 | 0.358 | 0.667503297862 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 1.77E-05 | 0 |
R/C | rs199594729 | -0.478 | 1.0 | N | 0.532 | 0.358 | 0.667503297862 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 0 | 1.96412E-04 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
R/C | rs199594729 | -0.478 | 1.0 | N | 0.532 | 0.358 | 0.667503297862 | gnomAD-4.0.0 | 9.91489E-06 | None | None | None | None | N | None | 2.67008E-05 | 5.00033E-05 | None | 0 | 4.45494E-05 | None | 0 | 0 | 4.23786E-06 | 1.09786E-05 | 4.80261E-05 |
R/H | rs372584865 | -1.193 | 0.067 | N | 0.345 | 0.203 | None | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 1.77E-05 | 0 |
R/H | rs372584865 | -1.193 | 0.067 | N | 0.345 | 0.203 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/H | rs372584865 | -1.193 | 0.067 | N | 0.345 | 0.203 | None | gnomAD-4.0.0 | 1.61112E-05 | None | None | None | None | N | None | 1.33522E-05 | 1.66672E-05 | None | 0 | 0 | None | 0 | 0 | 1.69512E-05 | 2.19553E-05 | 3.20184E-05 |
R/P | rs372584865 | None | 0.994 | N | 0.555 | 0.331 | 0.50466331119 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/P | rs372584865 | None | 0.994 | N | 0.555 | 0.331 | 0.50466331119 | gnomAD-4.0.0 | 2.47865E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39024E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.4217 | ambiguous | 0.3856 | ambiguous | -0.274 | Destabilizing | 0.729 | D | 0.43 | neutral | None | None | None | None | N |
R/C | 0.186 | likely_benign | 0.1691 | benign | -0.361 | Destabilizing | 1.0 | D | 0.532 | neutral | N | 0.518540304 | None | None | N |
R/D | 0.705 | likely_pathogenic | 0.6813 | pathogenic | 0.037 | Stabilizing | 0.929 | D | 0.525 | neutral | None | None | None | None | N |
R/E | 0.4004 | ambiguous | 0.3786 | ambiguous | 0.147 | Stabilizing | 0.617 | D | 0.471 | neutral | None | None | None | None | N |
R/F | 0.6689 | likely_pathogenic | 0.6409 | pathogenic | -0.25 | Destabilizing | 0.974 | D | 0.547 | neutral | None | None | None | None | N |
R/G | 0.3258 | likely_benign | 0.2958 | benign | -0.542 | Destabilizing | 0.911 | D | 0.47 | neutral | N | 0.513902488 | None | None | N |
R/H | 0.1017 | likely_benign | 0.0844 | benign | -0.997 | Destabilizing | 0.067 | N | 0.345 | neutral | N | 0.442330392 | None | None | N |
R/I | 0.3907 | ambiguous | 0.4102 | ambiguous | 0.42 | Stabilizing | 0.975 | D | 0.549 | neutral | None | None | None | None | N |
R/K | 0.1173 | likely_benign | 0.1065 | benign | -0.283 | Destabilizing | 0.39 | N | 0.491 | neutral | None | None | None | None | N |
R/L | 0.3652 | ambiguous | 0.3464 | ambiguous | 0.42 | Stabilizing | 0.954 | D | 0.529 | neutral | N | 0.514249205 | None | None | N |
R/M | 0.4126 | ambiguous | 0.4129 | ambiguous | -0.093 | Destabilizing | 0.992 | D | 0.577 | neutral | None | None | None | None | N |
R/N | 0.5002 | ambiguous | 0.4711 | ambiguous | -0.007 | Destabilizing | 0.929 | D | 0.468 | neutral | None | None | None | None | N |
R/P | 0.9482 | likely_pathogenic | 0.9584 | pathogenic | 0.211 | Stabilizing | 0.994 | D | 0.555 | neutral | N | 0.521887253 | None | None | N |
R/Q | 0.1088 | likely_benign | 0.0978 | benign | -0.081 | Destabilizing | 0.951 | D | 0.526 | neutral | None | None | None | None | N |
R/S | 0.3911 | ambiguous | 0.3545 | ambiguous | -0.525 | Destabilizing | 0.29 | N | 0.312 | neutral | N | 0.402710424 | None | None | N |
R/T | 0.2222 | likely_benign | 0.2184 | benign | -0.247 | Destabilizing | 0.867 | D | 0.469 | neutral | None | None | None | None | N |
R/V | 0.4216 | ambiguous | 0.4225 | ambiguous | 0.211 | Stabilizing | 0.888 | D | 0.559 | neutral | None | None | None | None | N |
R/W | 0.3375 | likely_benign | 0.3073 | benign | -0.136 | Destabilizing | 0.999 | D | 0.551 | neutral | None | None | None | None | N |
R/Y | 0.5197 | ambiguous | 0.4687 | ambiguous | 0.22 | Stabilizing | 0.948 | D | 0.555 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.