Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33748 | 101467;101468;101469 | chr2:178535373;178535372;178535371 | chr2:179400100;179400099;179400098 |
N2AB | 32107 | 96544;96545;96546 | chr2:178535373;178535372;178535371 | chr2:179400100;179400099;179400098 |
N2A | 31180 | 93763;93764;93765 | chr2:178535373;178535372;178535371 | chr2:179400100;179400099;179400098 |
N2B | 24683 | 74272;74273;74274 | chr2:178535373;178535372;178535371 | chr2:179400100;179400099;179400098 |
Novex-1 | 24808 | 74647;74648;74649 | chr2:178535373;178535372;178535371 | chr2:179400100;179400099;179400098 |
Novex-2 | 24875 | 74848;74849;74850 | chr2:178535373;178535372;178535371 | chr2:179400100;179400099;179400098 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs750315507 | 0.114 | 1.0 | N | 0.846 | 0.484 | 0.545869088564 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
T/I | rs750315507 | 0.114 | 1.0 | N | 0.846 | 0.484 | 0.545869088564 | gnomAD-4.0.0 | 1.36836E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79884E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2318 | likely_benign | 0.2034 | benign | -0.664 | Destabilizing | 0.988 | D | 0.562 | neutral | N | 0.503170993 | None | None | N |
T/C | 0.7107 | likely_pathogenic | 0.6643 | pathogenic | -0.458 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
T/D | 0.8737 | likely_pathogenic | 0.8619 | pathogenic | 0.242 | Stabilizing | 0.999 | D | 0.836 | deleterious | None | None | None | None | N |
T/E | 0.7744 | likely_pathogenic | 0.7438 | pathogenic | 0.25 | Stabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
T/F | 0.8313 | likely_pathogenic | 0.8202 | pathogenic | -0.818 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
T/G | 0.686 | likely_pathogenic | 0.6761 | pathogenic | -0.91 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
T/H | 0.6573 | likely_pathogenic | 0.6134 | pathogenic | -1.109 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
T/I | 0.4984 | ambiguous | 0.4609 | ambiguous | -0.109 | Destabilizing | 1.0 | D | 0.846 | deleterious | N | 0.472933083 | None | None | N |
T/K | 0.585 | likely_pathogenic | 0.551 | ambiguous | -0.481 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
T/L | 0.3323 | likely_benign | 0.3076 | benign | -0.109 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
T/M | 0.2249 | likely_benign | 0.2024 | benign | -0.071 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
T/N | 0.407 | ambiguous | 0.3578 | ambiguous | -0.483 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | N | 0.477706023 | None | None | N |
T/P | 0.4329 | ambiguous | 0.4393 | ambiguous | -0.262 | Destabilizing | 0.999 | D | 0.848 | deleterious | D | 0.523527623 | None | None | N |
T/Q | 0.5305 | ambiguous | 0.4807 | ambiguous | -0.553 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
T/R | 0.5253 | ambiguous | 0.4904 | ambiguous | -0.32 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
T/S | 0.3076 | likely_benign | 0.2773 | benign | -0.78 | Destabilizing | 0.988 | D | 0.528 | neutral | N | 0.476553934 | None | None | N |
T/V | 0.3267 | likely_benign | 0.2943 | benign | -0.262 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
T/W | 0.9433 | likely_pathogenic | 0.9417 | pathogenic | -0.799 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
T/Y | 0.8337 | likely_pathogenic | 0.8256 | pathogenic | -0.527 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.