Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33750 | 101473;101474;101475 | chr2:178535367;178535366;178535365 | chr2:179400094;179400093;179400092 |
N2AB | 32109 | 96550;96551;96552 | chr2:178535367;178535366;178535365 | chr2:179400094;179400093;179400092 |
N2A | 31182 | 93769;93770;93771 | chr2:178535367;178535366;178535365 | chr2:179400094;179400093;179400092 |
N2B | 24685 | 74278;74279;74280 | chr2:178535367;178535366;178535365 | chr2:179400094;179400093;179400092 |
Novex-1 | 24810 | 74653;74654;74655 | chr2:178535367;178535366;178535365 | chr2:179400094;179400093;179400092 |
Novex-2 | 24877 | 74854;74855;74856 | chr2:178535367;178535366;178535365 | chr2:179400094;179400093;179400092 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs1690954165 | None | 0.9 | N | 0.503 | 0.172 | None | gnomAD-4.0.0 | 6.3642E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 7.53296E-05 | 0 | 0 | 0 | 0 |
I/T | None | None | 0.659 | N | 0.489 | 0.346 | 0.522717468363 | gnomAD-4.0.0 | 1.36834E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79884E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5622 | ambiguous | 0.476 | ambiguous | -1.177 | Destabilizing | 0.638 | D | 0.465 | neutral | None | None | None | None | N |
I/C | 0.7246 | likely_pathogenic | 0.7312 | pathogenic | -0.794 | Destabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | N |
I/D | 0.9012 | likely_pathogenic | 0.8755 | pathogenic | -0.282 | Destabilizing | 0.995 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/E | 0.8254 | likely_pathogenic | 0.7623 | pathogenic | -0.325 | Destabilizing | 0.978 | D | 0.677 | prob.neutral | None | None | None | None | N |
I/F | 0.3526 | ambiguous | 0.3042 | benign | -0.894 | Destabilizing | 0.9 | D | 0.503 | neutral | N | 0.455430188 | None | None | N |
I/G | 0.7945 | likely_pathogenic | 0.7477 | pathogenic | -1.431 | Destabilizing | 0.984 | D | 0.658 | neutral | None | None | None | None | N |
I/H | 0.7922 | likely_pathogenic | 0.7614 | pathogenic | -0.562 | Destabilizing | 0.997 | D | 0.713 | prob.delet. | None | None | None | None | N |
I/K | 0.7019 | likely_pathogenic | 0.6055 | pathogenic | -0.656 | Destabilizing | 0.641 | D | 0.687 | prob.neutral | None | None | None | None | N |
I/L | 0.2098 | likely_benign | 0.1883 | benign | -0.592 | Destabilizing | 0.017 | N | 0.253 | neutral | N | 0.42903302 | None | None | N |
I/M | 0.1578 | likely_benign | 0.1451 | benign | -0.5 | Destabilizing | 0.73 | D | 0.567 | neutral | N | 0.497450169 | None | None | N |
I/N | 0.5208 | ambiguous | 0.4436 | ambiguous | -0.439 | Destabilizing | 0.993 | D | 0.725 | prob.delet. | N | 0.454043321 | None | None | N |
I/P | 0.846 | likely_pathogenic | 0.8312 | pathogenic | -0.754 | Destabilizing | 0.995 | D | 0.717 | prob.delet. | None | None | None | None | N |
I/Q | 0.6855 | likely_pathogenic | 0.6184 | pathogenic | -0.634 | Destabilizing | 0.987 | D | 0.729 | prob.delet. | None | None | None | None | N |
I/R | 0.6168 | likely_pathogenic | 0.5342 | ambiguous | -0.069 | Destabilizing | 0.96 | D | 0.726 | prob.delet. | None | None | None | None | N |
I/S | 0.4981 | ambiguous | 0.4458 | ambiguous | -1.051 | Destabilizing | 0.958 | D | 0.635 | neutral | N | 0.413138061 | None | None | N |
I/T | 0.3358 | likely_benign | 0.2405 | benign | -0.973 | Destabilizing | 0.659 | D | 0.489 | neutral | N | 0.401688916 | None | None | N |
I/V | 0.1059 | likely_benign | 0.0743 | benign | -0.754 | Destabilizing | None | N | 0.153 | neutral | N | 0.433457405 | None | None | N |
I/W | 0.8661 | likely_pathogenic | 0.8969 | pathogenic | -0.886 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
I/Y | 0.7041 | likely_pathogenic | 0.7361 | pathogenic | -0.665 | Destabilizing | 0.739 | D | 0.664 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.