Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33757 | 101494;101495;101496 | chr2:178535346;178535345;178535344 | chr2:179400073;179400072;179400071 |
N2AB | 32116 | 96571;96572;96573 | chr2:178535346;178535345;178535344 | chr2:179400073;179400072;179400071 |
N2A | 31189 | 93790;93791;93792 | chr2:178535346;178535345;178535344 | chr2:179400073;179400072;179400071 |
N2B | 24692 | 74299;74300;74301 | chr2:178535346;178535345;178535344 | chr2:179400073;179400072;179400071 |
Novex-1 | 24817 | 74674;74675;74676 | chr2:178535346;178535345;178535344 | chr2:179400073;179400072;179400071 |
Novex-2 | 24884 | 74875;74876;74877 | chr2:178535346;178535345;178535344 | chr2:179400073;179400072;179400071 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs1210718667 | -0.362 | 0.342 | N | 0.407 | 0.105 | 0.18274738541 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
S/N | rs1210718667 | -0.362 | 0.342 | N | 0.407 | 0.105 | 0.18274738541 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/N | rs1210718667 | -0.362 | 0.342 | N | 0.407 | 0.105 | 0.18274738541 | gnomAD-4.0.0 | 6.57099E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46968E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0814 | likely_benign | 0.0917 | benign | -0.84 | Destabilizing | 0.082 | N | 0.299 | neutral | None | None | None | None | N |
S/C | 0.131 | likely_benign | 0.1617 | benign | -0.686 | Destabilizing | 0.997 | D | 0.463 | neutral | N | 0.468116782 | None | None | N |
S/D | 0.6626 | likely_pathogenic | 0.712 | pathogenic | -0.913 | Destabilizing | 0.854 | D | 0.39 | neutral | None | None | None | None | N |
S/E | 0.5798 | likely_pathogenic | 0.6588 | pathogenic | -0.875 | Destabilizing | 0.772 | D | 0.397 | neutral | None | None | None | None | N |
S/F | 0.4858 | ambiguous | 0.5134 | ambiguous | -0.985 | Destabilizing | 0.994 | D | 0.591 | neutral | None | None | None | None | N |
S/G | 0.1375 | likely_benign | 0.1561 | benign | -1.106 | Destabilizing | 0.772 | D | 0.405 | neutral | N | 0.485734452 | None | None | N |
S/H | 0.4279 | ambiguous | 0.5274 | ambiguous | -1.564 | Destabilizing | 0.994 | D | 0.481 | neutral | None | None | None | None | N |
S/I | 0.2737 | likely_benign | 0.3467 | ambiguous | -0.224 | Destabilizing | 0.983 | D | 0.523 | neutral | N | 0.48338758 | None | None | N |
S/K | 0.6308 | likely_pathogenic | 0.7625 | pathogenic | -0.671 | Destabilizing | 0.11 | N | 0.124 | neutral | None | None | None | None | N |
S/L | 0.1773 | likely_benign | 0.2108 | benign | -0.224 | Destabilizing | 0.917 | D | 0.427 | neutral | None | None | None | None | N |
S/M | 0.2782 | likely_benign | 0.3533 | ambiguous | 0.049 | Stabilizing | 0.998 | D | 0.48 | neutral | None | None | None | None | N |
S/N | 0.1774 | likely_benign | 0.221 | benign | -0.824 | Destabilizing | 0.342 | N | 0.407 | neutral | N | 0.441076811 | None | None | N |
S/P | 0.4 | ambiguous | 0.4739 | ambiguous | -0.396 | Destabilizing | 0.977 | D | 0.452 | neutral | None | None | None | None | N |
S/Q | 0.447 | ambiguous | 0.5555 | ambiguous | -0.984 | Destabilizing | 0.956 | D | 0.441 | neutral | None | None | None | None | N |
S/R | 0.5543 | ambiguous | 0.655 | pathogenic | -0.608 | Destabilizing | 0.049 | N | 0.318 | neutral | N | 0.471303717 | None | None | N |
S/T | 0.0962 | likely_benign | 0.1162 | benign | -0.751 | Destabilizing | 0.007 | N | 0.117 | neutral | N | 0.429841097 | None | None | N |
S/V | 0.248 | likely_benign | 0.3174 | benign | -0.396 | Destabilizing | 0.804 | D | 0.465 | neutral | None | None | None | None | N |
S/W | 0.6531 | likely_pathogenic | 0.6806 | pathogenic | -0.996 | Destabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | N |
S/Y | 0.3798 | ambiguous | 0.4087 | ambiguous | -0.688 | Destabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.