Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33780 | 101563;101564;101565 | chr2:178535277;178535276;178535275 | chr2:179400004;179400003;179400002 |
N2AB | 32139 | 96640;96641;96642 | chr2:178535277;178535276;178535275 | chr2:179400004;179400003;179400002 |
N2A | 31212 | 93859;93860;93861 | chr2:178535277;178535276;178535275 | chr2:179400004;179400003;179400002 |
N2B | 24715 | 74368;74369;74370 | chr2:178535277;178535276;178535275 | chr2:179400004;179400003;179400002 |
Novex-1 | 24840 | 74743;74744;74745 | chr2:178535277;178535276;178535275 | chr2:179400004;179400003;179400002 |
Novex-2 | 24907 | 74944;74945;74946 | chr2:178535277;178535276;178535275 | chr2:179400004;179400003;179400002 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs2154136558 | None | None | N | 0.355 | 0.195 | 0.239901079897 | gnomAD-4.0.0 | 1.36835E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31863E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0932 | likely_benign | 0.0966 | benign | -0.902 | Destabilizing | 0.003 | N | 0.332 | neutral | N | 0.45422504 | None | None | N |
T/C | 0.3352 | likely_benign | 0.3573 | ambiguous | -0.45 | Destabilizing | 0.923 | D | 0.465 | neutral | None | None | None | None | N |
T/D | 0.8432 | likely_pathogenic | 0.8718 | pathogenic | 0.044 | Stabilizing | 0.495 | N | 0.52 | neutral | None | None | None | None | N |
T/E | 0.6147 | likely_pathogenic | 0.6542 | pathogenic | 0.173 | Stabilizing | 0.518 | D | 0.504 | neutral | None | None | None | None | N |
T/F | 0.3464 | ambiguous | 0.3928 | ambiguous | -0.812 | Destabilizing | 0.664 | D | 0.543 | neutral | None | None | None | None | N |
T/G | 0.5508 | ambiguous | 0.5858 | pathogenic | -1.261 | Destabilizing | 0.73 | D | 0.471 | neutral | None | None | None | None | N |
T/H | 0.4489 | ambiguous | 0.5333 | ambiguous | -1.325 | Destabilizing | 0.984 | D | 0.545 | neutral | None | None | None | None | N |
T/I | 0.1054 | likely_benign | 0.1094 | benign | None | Stabilizing | None | N | 0.355 | neutral | N | 0.338880737 | None | None | N |
T/K | 0.4684 | ambiguous | 0.5292 | ambiguous | -0.143 | Destabilizing | 0.6 | D | 0.517 | neutral | None | None | None | None | N |
T/L | 0.1278 | likely_benign | 0.1367 | benign | None | Stabilizing | 0.028 | N | 0.33 | neutral | None | None | None | None | N |
T/M | 0.1088 | likely_benign | 0.11 | benign | -0.002 | Destabilizing | 0.722 | D | 0.493 | neutral | None | None | None | None | N |
T/N | 0.367 | ambiguous | 0.4124 | ambiguous | -0.535 | Destabilizing | 0.722 | D | 0.485 | neutral | N | 0.484721306 | None | None | N |
T/P | 0.7007 | likely_pathogenic | 0.7455 | pathogenic | -0.268 | Destabilizing | 0.722 | D | 0.547 | neutral | N | 0.484894664 | None | None | N |
T/Q | 0.4087 | ambiguous | 0.4567 | ambiguous | -0.408 | Destabilizing | 0.882 | D | 0.495 | neutral | None | None | None | None | N |
T/R | 0.407 | ambiguous | 0.4607 | ambiguous | -0.26 | Destabilizing | 0.934 | D | 0.544 | neutral | None | None | None | None | N |
T/S | 0.2326 | likely_benign | 0.2515 | benign | -0.933 | Destabilizing | 0.032 | N | 0.384 | neutral | N | 0.483854514 | None | None | N |
T/V | 0.0824 | likely_benign | 0.0821 | benign | -0.268 | Destabilizing | None | N | 0.207 | neutral | None | None | None | None | N |
T/W | 0.7948 | likely_pathogenic | 0.8405 | pathogenic | -0.812 | Destabilizing | 0.994 | D | 0.617 | neutral | None | None | None | None | N |
T/Y | 0.4387 | ambiguous | 0.5093 | ambiguous | -0.469 | Destabilizing | 0.934 | D | 0.562 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.