Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3380 | 10363;10364;10365 | chr2:178759149;178759148;178759147 | chr2:179623876;179623875;179623874 |
N2AB | 3380 | 10363;10364;10365 | chr2:178759149;178759148;178759147 | chr2:179623876;179623875;179623874 |
N2A | 3380 | 10363;10364;10365 | chr2:178759149;178759148;178759147 | chr2:179623876;179623875;179623874 |
N2B | 3334 | 10225;10226;10227 | chr2:178759149;178759148;178759147 | chr2:179623876;179623875;179623874 |
Novex-1 | 3334 | 10225;10226;10227 | chr2:178759149;178759148;178759147 | chr2:179623876;179623875;179623874 |
Novex-2 | 3334 | 10225;10226;10227 | chr2:178759149;178759148;178759147 | chr2:179623876;179623875;179623874 |
Novex-3 | 3380 | 10363;10364;10365 | chr2:178759149;178759148;178759147 | chr2:179623876;179623875;179623874 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs984535715 | 0.314 | 0.014 | N | 0.344 | 0.108 | 0.288352970974 | gnomAD-2.1.1 | 4E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
K/R | rs984535715 | 0.314 | 0.014 | N | 0.344 | 0.108 | 0.288352970974 | gnomAD-4.0.0 | 9.57781E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.25908E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3865 | ambiguous | 0.4625 | ambiguous | -0.295 | Destabilizing | 0.86 | D | 0.596 | neutral | None | None | None | None | N |
K/C | 0.8224 | likely_pathogenic | 0.8056 | pathogenic | -0.276 | Destabilizing | 0.998 | D | 0.682 | prob.neutral | None | None | None | None | N |
K/D | 0.5455 | ambiguous | 0.6252 | pathogenic | 0.417 | Stabilizing | 0.915 | D | 0.545 | neutral | None | None | None | None | N |
K/E | 0.1792 | likely_benign | 0.2092 | benign | 0.452 | Stabilizing | 0.822 | D | 0.573 | neutral | N | 0.471412813 | None | None | N |
K/F | 0.8748 | likely_pathogenic | 0.9019 | pathogenic | -0.409 | Destabilizing | 0.998 | D | 0.658 | neutral | None | None | None | None | N |
K/G | 0.3385 | likely_benign | 0.3719 | ambiguous | -0.546 | Destabilizing | 0.86 | D | 0.571 | neutral | None | None | None | None | N |
K/H | 0.4238 | ambiguous | 0.44 | ambiguous | -0.989 | Destabilizing | 0.978 | D | 0.563 | neutral | None | None | None | None | N |
K/I | 0.6188 | likely_pathogenic | 0.7082 | pathogenic | 0.303 | Stabilizing | 0.971 | D | 0.667 | neutral | D | 0.616884908 | None | None | N |
K/L | 0.5034 | ambiguous | 0.5742 | pathogenic | 0.303 | Stabilizing | 0.956 | D | 0.517 | neutral | None | None | None | None | N |
K/M | 0.3858 | ambiguous | 0.4225 | ambiguous | 0.283 | Stabilizing | 0.998 | D | 0.563 | neutral | None | None | None | None | N |
K/N | 0.4113 | ambiguous | 0.4801 | ambiguous | 0.208 | Stabilizing | 0.126 | N | 0.34 | neutral | N | 0.419768235 | None | None | N |
K/P | 0.7354 | likely_pathogenic | 0.871 | pathogenic | 0.133 | Stabilizing | 0.978 | D | 0.579 | neutral | None | None | None | None | N |
K/Q | 0.1627 | likely_benign | 0.1694 | benign | 0.01 | Stabilizing | 0.942 | D | 0.558 | neutral | N | 0.505917299 | None | None | N |
K/R | 0.0883 | likely_benign | 0.0843 | benign | -0.163 | Destabilizing | 0.014 | N | 0.344 | neutral | N | 0.518396224 | None | None | N |
K/S | 0.4264 | ambiguous | 0.5064 | ambiguous | -0.465 | Destabilizing | 0.86 | D | 0.56 | neutral | None | None | None | None | N |
K/T | 0.2947 | likely_benign | 0.373 | ambiguous | -0.256 | Destabilizing | 0.822 | D | 0.554 | neutral | N | 0.517421307 | None | None | N |
K/V | 0.549 | ambiguous | 0.6306 | pathogenic | 0.133 | Stabilizing | 0.956 | D | 0.609 | neutral | None | None | None | None | N |
K/W | 0.8367 | likely_pathogenic | 0.8487 | pathogenic | -0.304 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/Y | 0.7578 | likely_pathogenic | 0.7919 | pathogenic | 0.034 | Stabilizing | 0.993 | D | 0.615 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.