Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34147 | 102664;102665;102666 | chr2:178534176;178534175;178534174 | chr2:179398903;179398902;179398901 |
N2AB | 32506 | 97741;97742;97743 | chr2:178534176;178534175;178534174 | chr2:179398903;179398902;179398901 |
N2A | 31579 | 94960;94961;94962 | chr2:178534176;178534175;178534174 | chr2:179398903;179398902;179398901 |
N2B | 25082 | 75469;75470;75471 | chr2:178534176;178534175;178534174 | chr2:179398903;179398902;179398901 |
Novex-1 | 25207 | 75844;75845;75846 | chr2:178534176;178534175;178534174 | chr2:179398903;179398902;179398901 |
Novex-2 | 25274 | 76045;76046;76047 | chr2:178534176;178534175;178534174 | chr2:179398903;179398902;179398901 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | None | None | None | N | 0.33 | 0.125 | 0.208000267992 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1158 | likely_benign | 0.1149 | benign | -0.627 | Destabilizing | None | N | 0.101 | neutral | N | 0.370014507 | None | None | N |
G/C | 0.3158 | likely_benign | 0.3867 | ambiguous | -0.86 | Destabilizing | 0.78 | D | 0.577 | neutral | N | 0.403111147 | None | None | N |
G/D | 0.5314 | ambiguous | 0.5809 | pathogenic | -1.097 | Destabilizing | 0.062 | N | 0.554 | neutral | N | 0.468277347 | None | None | N |
G/E | 0.4437 | ambiguous | 0.5123 | ambiguous | -1.117 | Destabilizing | 0.081 | N | 0.545 | neutral | None | None | None | None | N |
G/F | 0.7646 | likely_pathogenic | 0.7923 | pathogenic | -0.807 | Destabilizing | 0.38 | N | 0.621 | neutral | None | None | None | None | N |
G/H | 0.7081 | likely_pathogenic | 0.7229 | pathogenic | -1.369 | Destabilizing | 0.824 | D | 0.535 | neutral | None | None | None | None | N |
G/I | 0.41 | ambiguous | 0.4352 | ambiguous | -0.13 | Destabilizing | 0.029 | N | 0.581 | neutral | None | None | None | None | N |
G/K | 0.662 | likely_pathogenic | 0.7023 | pathogenic | -1.249 | Destabilizing | 0.081 | N | 0.551 | neutral | None | None | None | None | N |
G/L | 0.5533 | ambiguous | 0.5963 | pathogenic | -0.13 | Destabilizing | 0.081 | N | 0.513 | neutral | None | None | None | None | N |
G/M | 0.634 | likely_pathogenic | 0.6562 | pathogenic | -0.208 | Destabilizing | 0.38 | N | 0.592 | neutral | None | None | None | None | N |
G/N | 0.5998 | likely_pathogenic | 0.6255 | pathogenic | -0.98 | Destabilizing | 0.081 | N | 0.534 | neutral | None | None | None | None | N |
G/P | 0.953 | likely_pathogenic | 0.9758 | pathogenic | -0.253 | Destabilizing | 0.38 | N | 0.579 | neutral | None | None | None | None | N |
G/Q | 0.5863 | likely_pathogenic | 0.6134 | pathogenic | -1.083 | Destabilizing | 0.38 | N | 0.573 | neutral | None | None | None | None | N |
G/R | 0.5298 | ambiguous | 0.5523 | ambiguous | -1.044 | Destabilizing | 0.317 | N | 0.573 | neutral | N | 0.486343033 | None | None | N |
G/S | 0.1314 | likely_benign | 0.1358 | benign | -1.259 | Destabilizing | None | N | 0.147 | neutral | N | 0.467583914 | None | None | N |
G/T | 0.2145 | likely_benign | 0.2398 | benign | -1.192 | Destabilizing | 0.081 | N | 0.464 | neutral | None | None | None | None | N |
G/V | 0.2536 | likely_benign | 0.2869 | benign | -0.253 | Destabilizing | None | N | 0.33 | neutral | N | 0.35300204 | None | None | N |
G/W | 0.668 | likely_pathogenic | 0.7037 | pathogenic | -1.263 | Destabilizing | 0.935 | D | 0.539 | neutral | None | None | None | None | N |
G/Y | 0.694 | likely_pathogenic | 0.7166 | pathogenic | -0.8 | Destabilizing | 0.555 | D | 0.611 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.