Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34168 | 102727;102728;102729 | chr2:178534113;178534112;178534111 | chr2:179398840;179398839;179398838 |
N2AB | 32527 | 97804;97805;97806 | chr2:178534113;178534112;178534111 | chr2:179398840;179398839;179398838 |
N2A | 31600 | 95023;95024;95025 | chr2:178534113;178534112;178534111 | chr2:179398840;179398839;179398838 |
N2B | 25103 | 75532;75533;75534 | chr2:178534113;178534112;178534111 | chr2:179398840;179398839;179398838 |
Novex-1 | 25228 | 75907;75908;75909 | chr2:178534113;178534112;178534111 | chr2:179398840;179398839;179398838 |
Novex-2 | 25295 | 76108;76109;76110 | chr2:178534113;178534112;178534111 | chr2:179398840;179398839;179398838 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1022062534 | None | 0.999 | D | 0.619 | 0.779 | 0.802205998338 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/A | rs1022062534 | None | 0.999 | D | 0.619 | 0.779 | 0.802205998338 | gnomAD-4.0.0 | 3.04488E-06 | None | None | None | None | N | None | 5.24219E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7389 | likely_pathogenic | 0.7103 | pathogenic | -1.646 | Destabilizing | 0.999 | D | 0.619 | neutral | D | 0.551333465 | None | None | N |
V/C | 0.9711 | likely_pathogenic | 0.9731 | pathogenic | -0.962 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
V/D | 0.9906 | likely_pathogenic | 0.9886 | pathogenic | -1.836 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
V/E | 0.9732 | likely_pathogenic | 0.9686 | pathogenic | -1.711 | Destabilizing | 1.0 | D | 0.859 | deleterious | D | 0.577880598 | None | None | N |
V/F | 0.8791 | likely_pathogenic | 0.853 | pathogenic | -1.043 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
V/G | 0.8798 | likely_pathogenic | 0.8535 | pathogenic | -2.087 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | D | 0.577880598 | None | None | N |
V/H | 0.9929 | likely_pathogenic | 0.9917 | pathogenic | -1.784 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/I | 0.1822 | likely_benign | 0.1739 | benign | -0.47 | Destabilizing | 0.998 | D | 0.583 | neutral | None | None | None | None | N |
V/K | 0.9744 | likely_pathogenic | 0.9688 | pathogenic | -1.379 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
V/L | 0.8212 | likely_pathogenic | 0.7972 | pathogenic | -0.47 | Destabilizing | 0.997 | D | 0.643 | neutral | D | 0.562336452 | None | None | N |
V/M | 0.7476 | likely_pathogenic | 0.719 | pathogenic | -0.336 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | D | 0.561457628 | None | None | N |
V/N | 0.9743 | likely_pathogenic | 0.9695 | pathogenic | -1.378 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/P | 0.972 | likely_pathogenic | 0.9619 | pathogenic | -0.831 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/Q | 0.9742 | likely_pathogenic | 0.9705 | pathogenic | -1.364 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/R | 0.9691 | likely_pathogenic | 0.962 | pathogenic | -1.089 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/S | 0.925 | likely_pathogenic | 0.9156 | pathogenic | -1.933 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
V/T | 0.8276 | likely_pathogenic | 0.8206 | pathogenic | -1.68 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
V/W | 0.9975 | likely_pathogenic | 0.9969 | pathogenic | -1.456 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
V/Y | 0.9825 | likely_pathogenic | 0.9786 | pathogenic | -1.07 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.