Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34193 | 102802;102803;102804 | chr2:178534038;178534037;178534036 | chr2:179398765;179398764;179398763 |
N2AB | 32552 | 97879;97880;97881 | chr2:178534038;178534037;178534036 | chr2:179398765;179398764;179398763 |
N2A | 31625 | 95098;95099;95100 | chr2:178534038;178534037;178534036 | chr2:179398765;179398764;179398763 |
N2B | 25128 | 75607;75608;75609 | chr2:178534038;178534037;178534036 | chr2:179398765;179398764;179398763 |
Novex-1 | 25253 | 75982;75983;75984 | chr2:178534038;178534037;178534036 | chr2:179398765;179398764;179398763 |
Novex-2 | 25320 | 76183;76184;76185 | chr2:178534038;178534037;178534036 | chr2:179398765;179398764;179398763 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.065 | N | 0.47 | 0.162 | 0.582419091513 | gnomAD-4.0.0 | 1.59098E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85767E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.17 | likely_benign | 0.1673 | benign | -2.354 | Highly Destabilizing | 0.002 | N | 0.331 | neutral | None | None | None | None | N |
I/C | 0.4862 | ambiguous | 0.5206 | ambiguous | -1.468 | Destabilizing | 0.245 | N | 0.526 | neutral | None | None | None | None | N |
I/D | 0.5648 | likely_pathogenic | 0.6067 | pathogenic | -2.728 | Highly Destabilizing | 0.018 | N | 0.503 | neutral | None | None | None | None | N |
I/E | 0.3701 | ambiguous | 0.3878 | ambiguous | -2.511 | Highly Destabilizing | 0.018 | N | 0.508 | neutral | None | None | None | None | N |
I/F | 0.1484 | likely_benign | 0.1557 | benign | -1.419 | Destabilizing | 0.065 | N | 0.47 | neutral | N | 0.502331205 | None | None | N |
I/G | 0.5417 | ambiguous | 0.567 | pathogenic | -2.879 | Highly Destabilizing | 0.004 | N | 0.498 | neutral | None | None | None | None | N |
I/H | 0.2898 | likely_benign | 0.3107 | benign | -2.416 | Highly Destabilizing | 0.497 | N | 0.581 | neutral | None | None | None | None | N |
I/K | 0.2192 | likely_benign | 0.2362 | benign | -1.837 | Destabilizing | 0.018 | N | 0.505 | neutral | None | None | None | None | N |
I/L | 0.1141 | likely_benign | 0.1178 | benign | -0.842 | Destabilizing | 0.001 | N | 0.292 | neutral | N | 0.49434644 | None | None | N |
I/M | 0.0877 | likely_benign | 0.0889 | benign | -0.694 | Destabilizing | 0.196 | N | 0.517 | neutral | N | 0.513721635 | None | None | N |
I/N | 0.1555 | likely_benign | 0.1719 | benign | -2.148 | Highly Destabilizing | 0.014 | N | 0.501 | neutral | N | 0.488420546 | None | None | N |
I/P | 0.9355 | likely_pathogenic | 0.9461 | pathogenic | -1.327 | Destabilizing | 0.085 | N | 0.537 | neutral | None | None | None | None | N |
I/Q | 0.2702 | likely_benign | 0.2889 | benign | -2.022 | Highly Destabilizing | 0.085 | N | 0.586 | neutral | None | None | None | None | N |
I/R | 0.1616 | likely_benign | 0.1739 | benign | -1.546 | Destabilizing | 0.044 | N | 0.554 | neutral | None | None | None | None | N |
I/S | 0.1303 | likely_benign | 0.1333 | benign | -2.789 | Highly Destabilizing | None | N | 0.309 | neutral | N | 0.404916515 | None | None | N |
I/T | 0.0613 | likely_benign | 0.0612 | benign | -2.436 | Highly Destabilizing | None | N | 0.239 | neutral | N | 0.424480923 | None | None | N |
I/V | 0.0724 | likely_benign | 0.0739 | benign | -1.327 | Destabilizing | None | N | 0.135 | neutral | N | 0.429969675 | None | None | N |
I/W | 0.6558 | likely_pathogenic | 0.6913 | pathogenic | -1.879 | Destabilizing | 0.788 | D | 0.598 | neutral | None | None | None | None | N |
I/Y | 0.3115 | likely_benign | 0.3238 | benign | -1.542 | Destabilizing | 0.085 | N | 0.566 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.