Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34196 | 102811;102812;102813 | chr2:178534029;178534028;178534027 | chr2:179398756;179398755;179398754 |
N2AB | 32555 | 97888;97889;97890 | chr2:178534029;178534028;178534027 | chr2:179398756;179398755;179398754 |
N2A | 31628 | 95107;95108;95109 | chr2:178534029;178534028;178534027 | chr2:179398756;179398755;179398754 |
N2B | 25131 | 75616;75617;75618 | chr2:178534029;178534028;178534027 | chr2:179398756;179398755;179398754 |
Novex-1 | 25256 | 75991;75992;75993 | chr2:178534029;178534028;178534027 | chr2:179398756;179398755;179398754 |
Novex-2 | 25323 | 76192;76193;76194 | chr2:178534029;178534028;178534027 | chr2:179398756;179398755;179398754 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1185169765 | None | None | N | 0.255 | 0.099 | 0.110078149338 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1185169765 | None | None | N | 0.255 | 0.099 | 0.110078149338 | gnomAD-4.0.0 | 2.47856E-06 | None | None | None | None | N | None | 1.33479E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54264E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7502 | likely_pathogenic | 0.7123 | pathogenic | -2.615 | Highly Destabilizing | 0.104 | N | 0.639 | neutral | N | 0.491963888 | None | None | N |
V/C | 0.9154 | likely_pathogenic | 0.905 | pathogenic | -1.846 | Destabilizing | 0.968 | D | 0.808 | deleterious | None | None | None | None | N |
V/D | 0.973 | likely_pathogenic | 0.9609 | pathogenic | -3.341 | Highly Destabilizing | 0.667 | D | 0.897 | deleterious | N | 0.492724357 | None | None | N |
V/E | 0.9365 | likely_pathogenic | 0.9133 | pathogenic | -3.047 | Highly Destabilizing | 0.726 | D | 0.863 | deleterious | None | None | None | None | N |
V/F | 0.5592 | ambiguous | 0.5215 | ambiguous | -1.594 | Destabilizing | 0.331 | N | 0.789 | deleterious | N | 0.481593361 | None | None | N |
V/G | 0.8417 | likely_pathogenic | 0.8037 | pathogenic | -3.134 | Highly Destabilizing | 0.667 | D | 0.868 | deleterious | N | 0.492724357 | None | None | N |
V/H | 0.9701 | likely_pathogenic | 0.9571 | pathogenic | -2.907 | Highly Destabilizing | 0.968 | D | 0.889 | deleterious | None | None | None | None | N |
V/I | 0.0778 | likely_benign | 0.0799 | benign | -1.062 | Destabilizing | None | N | 0.255 | neutral | N | 0.367749701 | None | None | N |
V/K | 0.9347 | likely_pathogenic | 0.9099 | pathogenic | -2.184 | Highly Destabilizing | 0.726 | D | 0.861 | deleterious | None | None | None | None | N |
V/L | 0.3235 | likely_benign | 0.2959 | benign | -1.062 | Destabilizing | None | N | 0.337 | neutral | N | 0.46148466 | None | None | N |
V/M | 0.3568 | ambiguous | 0.3221 | benign | -1.333 | Destabilizing | 0.396 | N | 0.695 | prob.neutral | None | None | None | None | N |
V/N | 0.9204 | likely_pathogenic | 0.8908 | pathogenic | -2.906 | Highly Destabilizing | 0.89 | D | 0.888 | deleterious | None | None | None | None | N |
V/P | 0.9815 | likely_pathogenic | 0.9784 | pathogenic | -1.57 | Destabilizing | 0.89 | D | 0.875 | deleterious | None | None | None | None | N |
V/Q | 0.9224 | likely_pathogenic | 0.8887 | pathogenic | -2.542 | Highly Destabilizing | 0.89 | D | 0.881 | deleterious | None | None | None | None | N |
V/R | 0.917 | likely_pathogenic | 0.8776 | pathogenic | -2.278 | Highly Destabilizing | 0.726 | D | 0.889 | deleterious | None | None | None | None | N |
V/S | 0.8741 | likely_pathogenic | 0.8381 | pathogenic | -3.269 | Highly Destabilizing | 0.726 | D | 0.833 | deleterious | None | None | None | None | N |
V/T | 0.8066 | likely_pathogenic | 0.7855 | pathogenic | -2.837 | Highly Destabilizing | 0.272 | N | 0.66 | neutral | None | None | None | None | N |
V/W | 0.9862 | likely_pathogenic | 0.9818 | pathogenic | -1.958 | Destabilizing | 0.968 | D | 0.887 | deleterious | None | None | None | None | N |
V/Y | 0.9363 | likely_pathogenic | 0.92 | pathogenic | -1.84 | Destabilizing | 0.726 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.