Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34260 | 103003;103004;103005 | chr2:178533837;178533836;178533835 | chr2:179398564;179398563;179398562 |
N2AB | 32619 | 98080;98081;98082 | chr2:178533837;178533836;178533835 | chr2:179398564;179398563;179398562 |
N2A | 31692 | 95299;95300;95301 | chr2:178533837;178533836;178533835 | chr2:179398564;179398563;179398562 |
N2B | 25195 | 75808;75809;75810 | chr2:178533837;178533836;178533835 | chr2:179398564;179398563;179398562 |
Novex-1 | 25320 | 76183;76184;76185 | chr2:178533837;178533836;178533835 | chr2:179398564;179398563;179398562 |
Novex-2 | 25387 | 76384;76385;76386 | chr2:178533837;178533836;178533835 | chr2:179398564;179398563;179398562 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs767251580 | None | 0.76 | N | 0.627 | 0.659 | 0.438593652726 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
F/L | rs767251580 | None | 0.76 | N | 0.627 | 0.659 | 0.438593652726 | gnomAD-4.0.0 | 6.56978E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46998E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9975 | likely_pathogenic | 0.9978 | pathogenic | -2.877 | Highly Destabilizing | 0.953 | D | 0.783 | deleterious | None | None | None | None | N |
F/C | 0.9858 | likely_pathogenic | 0.9896 | pathogenic | -1.92 | Destabilizing | 0.999 | D | 0.835 | deleterious | D | 0.549299436 | None | None | N |
F/D | 0.999 | likely_pathogenic | 0.9991 | pathogenic | -2.722 | Highly Destabilizing | 0.998 | D | 0.84 | deleterious | None | None | None | None | N |
F/E | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -2.605 | Highly Destabilizing | 0.998 | D | 0.84 | deleterious | None | None | None | None | N |
F/G | 0.9985 | likely_pathogenic | 0.9989 | pathogenic | -3.246 | Highly Destabilizing | 0.998 | D | 0.829 | deleterious | None | None | None | None | N |
F/H | 0.9956 | likely_pathogenic | 0.9954 | pathogenic | -1.545 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
F/I | 0.9268 | likely_pathogenic | 0.9256 | pathogenic | -1.709 | Destabilizing | 0.1 | N | 0.477 | neutral | N | 0.489330542 | None | None | N |
F/K | 0.9991 | likely_pathogenic | 0.9989 | pathogenic | -1.707 | Destabilizing | 0.993 | D | 0.839 | deleterious | None | None | None | None | N |
F/L | 0.9965 | likely_pathogenic | 0.9972 | pathogenic | -1.709 | Destabilizing | 0.76 | D | 0.627 | neutral | N | 0.516036533 | None | None | N |
F/M | 0.9765 | likely_pathogenic | 0.9759 | pathogenic | -1.556 | Destabilizing | 0.986 | D | 0.681 | prob.neutral | None | None | None | None | N |
F/N | 0.9964 | likely_pathogenic | 0.9962 | pathogenic | -1.868 | Destabilizing | 0.998 | D | 0.847 | deleterious | None | None | None | None | N |
F/P | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -2.102 | Highly Destabilizing | 0.998 | D | 0.853 | deleterious | None | None | None | None | N |
F/Q | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -2.024 | Highly Destabilizing | 0.999 | D | 0.852 | deleterious | None | None | None | None | N |
F/R | 0.9981 | likely_pathogenic | 0.998 | pathogenic | -0.968 | Destabilizing | 0.998 | D | 0.857 | deleterious | None | None | None | None | N |
F/S | 0.9979 | likely_pathogenic | 0.9983 | pathogenic | -2.603 | Highly Destabilizing | 0.991 | D | 0.822 | deleterious | D | 0.566896712 | None | None | N |
F/T | 0.9979 | likely_pathogenic | 0.9979 | pathogenic | -2.386 | Highly Destabilizing | 0.986 | D | 0.799 | deleterious | None | None | None | None | N |
F/V | 0.9509 | likely_pathogenic | 0.9522 | pathogenic | -2.102 | Highly Destabilizing | 0.885 | D | 0.668 | neutral | N | 0.517251074 | None | None | N |
F/W | 0.9516 | likely_pathogenic | 0.964 | pathogenic | -0.635 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
F/Y | 0.74 | likely_pathogenic | 0.7653 | pathogenic | -0.921 | Destabilizing | 0.99 | D | 0.643 | neutral | D | 0.567150202 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.