Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34262 | 103009;103010;103011 | chr2:178533831;178533830;178533829 | chr2:179398558;179398557;179398556 |
N2AB | 32621 | 98086;98087;98088 | chr2:178533831;178533830;178533829 | chr2:179398558;179398557;179398556 |
N2A | 31694 | 95305;95306;95307 | chr2:178533831;178533830;178533829 | chr2:179398558;179398557;179398556 |
N2B | 25197 | 75814;75815;75816 | chr2:178533831;178533830;178533829 | chr2:179398558;179398557;179398556 |
Novex-1 | 25322 | 76189;76190;76191 | chr2:178533831;178533830;178533829 | chr2:179398558;179398557;179398556 |
Novex-2 | 25389 | 76390;76391;76392 | chr2:178533831;178533830;178533829 | chr2:179398558;179398557;179398556 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | None | None | 0.999 | N | 0.613 | 0.169 | 0.484985748688 | gnomAD-4.0.0 | 6.8416E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99408E-07 | 0 | 0 |
L/V | None | None | 0.989 | N | 0.443 | 0.164 | 0.511047945453 | gnomAD-4.0.0 | 6.8416E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99408E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8278 | likely_pathogenic | 0.8572 | pathogenic | -0.574 | Destabilizing | 0.966 | D | 0.499 | neutral | None | None | None | None | N |
L/C | 0.9115 | likely_pathogenic | 0.9514 | pathogenic | -0.677 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
L/D | 0.9871 | likely_pathogenic | 0.9894 | pathogenic | 0.087 | Stabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | N |
L/E | 0.9106 | likely_pathogenic | 0.9255 | pathogenic | 0.012 | Stabilizing | 0.998 | D | 0.673 | neutral | None | None | None | None | N |
L/F | 0.5124 | ambiguous | 0.6252 | pathogenic | -0.474 | Destabilizing | 0.999 | D | 0.604 | neutral | None | None | None | None | N |
L/G | 0.9677 | likely_pathogenic | 0.9742 | pathogenic | -0.752 | Destabilizing | 0.15 | N | 0.418 | neutral | None | None | None | None | N |
L/H | 0.824 | likely_pathogenic | 0.8868 | pathogenic | -0.001 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
L/I | 0.2721 | likely_benign | 0.3027 | benign | -0.225 | Destabilizing | 0.997 | D | 0.448 | neutral | None | None | None | None | N |
L/K | 0.8374 | likely_pathogenic | 0.853 | pathogenic | -0.307 | Destabilizing | 0.998 | D | 0.671 | neutral | None | None | None | None | N |
L/M | 0.3151 | likely_benign | 0.3625 | ambiguous | -0.364 | Destabilizing | 0.999 | D | 0.613 | neutral | N | 0.512625557 | None | None | N |
L/N | 0.9283 | likely_pathogenic | 0.945 | pathogenic | -0.16 | Destabilizing | 0.995 | D | 0.677 | prob.neutral | None | None | None | None | N |
L/P | 0.986 | likely_pathogenic | 0.9846 | pathogenic | -0.308 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | N | 0.495745642 | None | None | N |
L/Q | 0.7243 | likely_pathogenic | 0.7799 | pathogenic | -0.339 | Destabilizing | 0.999 | D | 0.655 | neutral | N | 0.431697684 | None | None | N |
L/R | 0.7405 | likely_pathogenic | 0.7944 | pathogenic | 0.196 | Stabilizing | 0.997 | D | 0.666 | neutral | N | 0.469680069 | None | None | N |
L/S | 0.8925 | likely_pathogenic | 0.9261 | pathogenic | -0.666 | Destabilizing | 0.995 | D | 0.613 | neutral | None | None | None | None | N |
L/T | 0.8369 | likely_pathogenic | 0.8659 | pathogenic | -0.627 | Destabilizing | 0.998 | D | 0.633 | neutral | None | None | None | None | N |
L/V | 0.3265 | likely_benign | 0.361 | ambiguous | -0.308 | Destabilizing | 0.989 | D | 0.443 | neutral | N | 0.471085579 | None | None | N |
L/W | 0.802 | likely_pathogenic | 0.8835 | pathogenic | -0.494 | Destabilizing | 1.0 | D | 0.648 | neutral | None | None | None | None | N |
L/Y | 0.8204 | likely_pathogenic | 0.8845 | pathogenic | -0.247 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.