Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34289 | 103090;103091;103092 | chr2:178533750;178533749;178533748 | chr2:179398477;179398476;179398475 |
N2AB | 32648 | 98167;98168;98169 | chr2:178533750;178533749;178533748 | chr2:179398477;179398476;179398475 |
N2A | 31721 | 95386;95387;95388 | chr2:178533750;178533749;178533748 | chr2:179398477;179398476;179398475 |
N2B | 25224 | 75895;75896;75897 | chr2:178533750;178533749;178533748 | chr2:179398477;179398476;179398475 |
Novex-1 | 25349 | 76270;76271;76272 | chr2:178533750;178533749;178533748 | chr2:179398477;179398476;179398475 |
Novex-2 | 25416 | 76471;76472;76473 | chr2:178533750;178533749;178533748 | chr2:179398477;179398476;179398475 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1370660271 | -1.753 | 0.939 | D | 0.655 | 0.752 | 0.792328519658 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
V/A | rs1370660271 | -1.753 | 0.939 | D | 0.655 | 0.752 | 0.792328519658 | gnomAD-4.0.0 | 3.18196E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85768E-06 | 0 | 3.02389E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.815 | likely_pathogenic | 0.8443 | pathogenic | -1.744 | Destabilizing | 0.939 | D | 0.655 | neutral | D | 0.588247644 | None | None | N |
V/C | 0.934 | likely_pathogenic | 0.9548 | pathogenic | -1.126 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/D | 0.9918 | likely_pathogenic | 0.993 | pathogenic | -1.901 | Destabilizing | 0.998 | D | 0.837 | deleterious | None | None | None | None | N |
V/E | 0.9765 | likely_pathogenic | 0.9793 | pathogenic | -1.745 | Destabilizing | 0.997 | D | 0.831 | deleterious | D | 0.626635174 | None | None | N |
V/F | 0.6756 | likely_pathogenic | 0.736 | pathogenic | -1.113 | Destabilizing | 0.986 | D | 0.729 | prob.delet. | None | None | None | None | N |
V/G | 0.9205 | likely_pathogenic | 0.9319 | pathogenic | -2.198 | Highly Destabilizing | 0.997 | D | 0.839 | deleterious | D | 0.626635174 | None | None | N |
V/H | 0.9904 | likely_pathogenic | 0.9932 | pathogenic | -1.737 | Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | N |
V/I | 0.0878 | likely_benign | 0.092 | benign | -0.519 | Destabilizing | 0.17 | N | 0.265 | neutral | N | 0.463186532 | None | None | N |
V/K | 0.9676 | likely_pathogenic | 0.9745 | pathogenic | -1.381 | Destabilizing | 0.993 | D | 0.831 | deleterious | None | None | None | None | N |
V/L | 0.4527 | ambiguous | 0.4932 | ambiguous | -0.519 | Destabilizing | 0.046 | N | 0.303 | neutral | D | 0.537878633 | None | None | N |
V/M | 0.487 | ambiguous | 0.5595 | ambiguous | -0.471 | Destabilizing | 0.986 | D | 0.662 | neutral | None | None | None | None | N |
V/N | 0.9778 | likely_pathogenic | 0.983 | pathogenic | -1.49 | Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | N |
V/P | 0.9645 | likely_pathogenic | 0.9724 | pathogenic | -0.898 | Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | N |
V/Q | 0.9708 | likely_pathogenic | 0.9758 | pathogenic | -1.437 | Destabilizing | 0.998 | D | 0.834 | deleterious | None | None | None | None | N |
V/R | 0.9561 | likely_pathogenic | 0.9639 | pathogenic | -1.136 | Destabilizing | 0.993 | D | 0.84 | deleterious | None | None | None | None | N |
V/S | 0.9489 | likely_pathogenic | 0.9615 | pathogenic | -2.076 | Highly Destabilizing | 0.993 | D | 0.827 | deleterious | None | None | None | None | N |
V/T | 0.8168 | likely_pathogenic | 0.8497 | pathogenic | -1.777 | Destabilizing | 0.976 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/W | 0.9904 | likely_pathogenic | 0.9942 | pathogenic | -1.461 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
V/Y | 0.9689 | likely_pathogenic | 0.9773 | pathogenic | -1.086 | Destabilizing | 0.993 | D | 0.712 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.