Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34315 | 103168;103169;103170 | chr2:178533672;178533671;178533670 | chr2:179398399;179398398;179398397 |
N2AB | 32674 | 98245;98246;98247 | chr2:178533672;178533671;178533670 | chr2:179398399;179398398;179398397 |
N2A | 31747 | 95464;95465;95466 | chr2:178533672;178533671;178533670 | chr2:179398399;179398398;179398397 |
N2B | 25250 | 75973;75974;75975 | chr2:178533672;178533671;178533670 | chr2:179398399;179398398;179398397 |
Novex-1 | 25375 | 76348;76349;76350 | chr2:178533672;178533671;178533670 | chr2:179398399;179398398;179398397 |
Novex-2 | 25442 | 76549;76550;76551 | chr2:178533672;178533671;178533670 | chr2:179398399;179398398;179398397 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs1305429779 | None | 0.955 | N | 0.521 | 0.279 | 0.503621591648 | gnomAD-4.0.0 | 1.59103E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85767E-06 | 0 | 0 |
L/V | rs1305429779 | None | 0.955 | N | 0.566 | 0.294 | 0.507687591559 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
L/V | rs1305429779 | None | 0.955 | N | 0.566 | 0.294 | 0.507687591559 | gnomAD-4.0.0 | 1.59103E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02371E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8393 | likely_pathogenic | 0.7601 | pathogenic | -1.572 | Destabilizing | 0.983 | D | 0.675 | neutral | None | None | None | None | N |
L/C | 0.8421 | likely_pathogenic | 0.8126 | pathogenic | -0.96 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
L/D | 0.9665 | likely_pathogenic | 0.9494 | pathogenic | -0.808 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
L/E | 0.8753 | likely_pathogenic | 0.8046 | pathogenic | -0.815 | Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
L/F | 0.4346 | ambiguous | 0.3758 | ambiguous | -1.155 | Destabilizing | 0.993 | D | 0.779 | deleterious | N | 0.500139049 | None | None | N |
L/G | 0.9349 | likely_pathogenic | 0.9146 | pathogenic | -1.88 | Destabilizing | 0.998 | D | 0.768 | deleterious | None | None | None | None | N |
L/H | 0.6793 | likely_pathogenic | 0.6009 | pathogenic | -1.086 | Destabilizing | 1.0 | D | 0.751 | deleterious | D | 0.527728295 | None | None | N |
L/I | 0.2329 | likely_benign | 0.1951 | benign | -0.811 | Destabilizing | 0.955 | D | 0.521 | neutral | N | 0.478030194 | None | None | N |
L/K | 0.693 | likely_pathogenic | 0.6058 | pathogenic | -0.867 | Destabilizing | 0.995 | D | 0.769 | deleterious | None | None | None | None | N |
L/M | 0.3115 | likely_benign | 0.2619 | benign | -0.634 | Destabilizing | 0.921 | D | 0.471 | neutral | None | None | None | None | N |
L/N | 0.826 | likely_pathogenic | 0.7488 | pathogenic | -0.644 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
L/P | 0.978 | likely_pathogenic | 0.977 | pathogenic | -1.033 | Destabilizing | 0.999 | D | 0.788 | deleterious | N | 0.488922014 | None | None | N |
L/Q | 0.5896 | likely_pathogenic | 0.469 | ambiguous | -0.852 | Destabilizing | 0.998 | D | 0.779 | deleterious | None | None | None | None | N |
L/R | 0.5071 | ambiguous | 0.4264 | ambiguous | -0.321 | Destabilizing | 0.997 | D | 0.777 | deleterious | N | 0.432508548 | None | None | N |
L/S | 0.8793 | likely_pathogenic | 0.8125 | pathogenic | -1.309 | Destabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | N |
L/T | 0.769 | likely_pathogenic | 0.6749 | pathogenic | -1.201 | Destabilizing | 0.995 | D | 0.756 | deleterious | None | None | None | None | N |
L/V | 0.3299 | likely_benign | 0.2725 | benign | -1.033 | Destabilizing | 0.955 | D | 0.566 | neutral | N | 0.458329712 | None | None | N |
L/W | 0.6724 | likely_pathogenic | 0.6406 | pathogenic | -1.176 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
L/Y | 0.738 | likely_pathogenic | 0.652 | pathogenic | -0.943 | Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.