Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34323 | 103192;103193;103194 | chr2:178533648;178533647;178533646 | chr2:179398375;179398374;179398373 |
N2AB | 32682 | 98269;98270;98271 | chr2:178533648;178533647;178533646 | chr2:179398375;179398374;179398373 |
N2A | 31755 | 95488;95489;95490 | chr2:178533648;178533647;178533646 | chr2:179398375;179398374;179398373 |
N2B | 25258 | 75997;75998;75999 | chr2:178533648;178533647;178533646 | chr2:179398375;179398374;179398373 |
Novex-1 | 25383 | 76372;76373;76374 | chr2:178533648;178533647;178533646 | chr2:179398375;179398374;179398373 |
Novex-2 | 25450 | 76573;76574;76575 | chr2:178533648;178533647;178533646 | chr2:179398375;179398374;179398373 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | rs1307866503 | None | 0.995 | D | 0.715 | 0.7 | 0.867032782884 | gnomAD-4.0.0 | 1.59099E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85763E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6069 | likely_pathogenic | 0.5874 | pathogenic | -2.099 | Highly Destabilizing | 0.78 | D | 0.564 | neutral | N | 0.456638988 | None | None | N |
V/C | 0.9267 | likely_pathogenic | 0.9265 | pathogenic | -2.423 | Highly Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
V/D | 0.9912 | likely_pathogenic | 0.9898 | pathogenic | -3.298 | Highly Destabilizing | 0.995 | D | 0.722 | prob.delet. | D | 0.535270105 | None | None | N |
V/E | 0.9799 | likely_pathogenic | 0.9782 | pathogenic | -3.199 | Highly Destabilizing | 0.996 | D | 0.676 | prob.neutral | None | None | None | None | N |
V/F | 0.8849 | likely_pathogenic | 0.8906 | pathogenic | -1.575 | Destabilizing | 0.968 | D | 0.709 | prob.delet. | N | 0.516405381 | None | None | N |
V/G | 0.8767 | likely_pathogenic | 0.8657 | pathogenic | -2.475 | Highly Destabilizing | 0.995 | D | 0.715 | prob.delet. | D | 0.535016615 | None | None | N |
V/H | 0.9954 | likely_pathogenic | 0.9952 | pathogenic | -1.881 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/I | 0.1024 | likely_benign | 0.1123 | benign | -1.096 | Destabilizing | 0.64 | D | 0.488 | neutral | N | 0.506529091 | None | None | N |
V/K | 0.985 | likely_pathogenic | 0.9811 | pathogenic | -1.935 | Destabilizing | 0.988 | D | 0.675 | prob.neutral | None | None | None | None | N |
V/L | 0.3629 | ambiguous | 0.3547 | ambiguous | -1.096 | Destabilizing | 0.004 | N | 0.262 | neutral | N | 0.472862021 | None | None | N |
V/M | 0.5313 | ambiguous | 0.5108 | ambiguous | -1.312 | Destabilizing | 0.976 | D | 0.649 | neutral | None | None | None | None | N |
V/N | 0.965 | likely_pathogenic | 0.9591 | pathogenic | -2.224 | Highly Destabilizing | 0.996 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/P | 0.9503 | likely_pathogenic | 0.938 | pathogenic | -1.404 | Destabilizing | 0.996 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/Q | 0.9811 | likely_pathogenic | 0.9768 | pathogenic | -2.33 | Highly Destabilizing | 0.996 | D | 0.665 | neutral | None | None | None | None | N |
V/R | 0.9775 | likely_pathogenic | 0.9744 | pathogenic | -1.435 | Destabilizing | 0.988 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/S | 0.8953 | likely_pathogenic | 0.8922 | pathogenic | -2.714 | Highly Destabilizing | 0.988 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/T | 0.6701 | likely_pathogenic | 0.5955 | pathogenic | -2.5 | Highly Destabilizing | 0.959 | D | 0.601 | neutral | None | None | None | None | N |
V/W | 0.9984 | likely_pathogenic | 0.9986 | pathogenic | -1.879 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/Y | 0.9922 | likely_pathogenic | 0.9933 | pathogenic | -1.58 | Destabilizing | 0.996 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.