Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34332 | 103219;103220;103221 | chr2:178533621;178533620;178533619 | chr2:179398348;179398347;179398346 |
N2AB | 32691 | 98296;98297;98298 | chr2:178533621;178533620;178533619 | chr2:179398348;179398347;179398346 |
N2A | 31764 | 95515;95516;95517 | chr2:178533621;178533620;178533619 | chr2:179398348;179398347;179398346 |
N2B | 25267 | 76024;76025;76026 | chr2:178533621;178533620;178533619 | chr2:179398348;179398347;179398346 |
Novex-1 | 25392 | 76399;76400;76401 | chr2:178533621;178533620;178533619 | chr2:179398348;179398347;179398346 |
Novex-2 | 25459 | 76600;76601;76602 | chr2:178533621;178533620;178533619 | chr2:179398348;179398347;179398346 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1450806366 | -1.379 | None | N | 0.291 | 0.123 | 0.0482279557977 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 9.2081E-04 |
T/A | rs1450806366 | -1.379 | None | N | 0.291 | 0.123 | 0.0482279557977 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 0 | 6.54E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.43678E-03 |
T/A | rs1450806366 | -1.379 | None | N | 0.291 | 0.123 | 0.0482279557977 | gnomAD-4.0.0 | 5.07448E-06 | None | None | None | None | N | None | 0 | 6.14704E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.36119E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1059 | likely_benign | 0.1496 | benign | -1.37 | Destabilizing | None | N | 0.291 | neutral | N | 0.485290869 | None | None | N |
T/C | 0.508 | ambiguous | 0.592 | pathogenic | -0.661 | Destabilizing | 0.883 | D | 0.595 | neutral | None | None | None | None | N |
T/D | 0.6477 | likely_pathogenic | 0.7987 | pathogenic | -1.446 | Destabilizing | 0.22 | N | 0.555 | neutral | None | None | None | None | N |
T/E | 0.4363 | ambiguous | 0.5538 | ambiguous | -1.172 | Destabilizing | 0.124 | N | 0.547 | neutral | None | None | None | None | N |
T/F | 0.3616 | ambiguous | 0.4924 | ambiguous | -0.952 | Destabilizing | 0.497 | N | 0.583 | neutral | None | None | None | None | N |
T/G | 0.4245 | ambiguous | 0.591 | pathogenic | -1.808 | Destabilizing | None | N | 0.48 | neutral | None | None | None | None | N |
T/H | 0.4047 | ambiguous | 0.4931 | ambiguous | -1.604 | Destabilizing | 0.667 | D | 0.604 | neutral | None | None | None | None | N |
T/I | 0.2268 | likely_benign | 0.3069 | benign | -0.18 | Destabilizing | 0.096 | N | 0.564 | neutral | N | 0.482615923 | None | None | N |
T/K | 0.3663 | ambiguous | 0.5164 | ambiguous | 0.057 | Stabilizing | 0.124 | N | 0.541 | neutral | None | None | None | None | N |
T/L | 0.1434 | likely_benign | 0.2269 | benign | -0.18 | Destabilizing | 0.055 | N | 0.514 | neutral | None | None | None | None | N |
T/M | 0.0927 | likely_benign | 0.1372 | benign | -0.401 | Destabilizing | 0.025 | N | 0.486 | neutral | None | None | None | None | N |
T/N | 0.2636 | likely_benign | 0.3833 | ambiguous | -0.797 | Destabilizing | 0.096 | N | 0.505 | neutral | N | 0.469315101 | None | None | N |
T/P | 0.8929 | likely_pathogenic | 0.9632 | pathogenic | -0.55 | Destabilizing | 0.301 | N | 0.599 | neutral | N | 0.48134297 | None | None | N |
T/Q | 0.3533 | ambiguous | 0.4442 | ambiguous | -0.467 | Destabilizing | 0.497 | N | 0.593 | neutral | None | None | None | None | N |
T/R | 0.2778 | likely_benign | 0.4212 | ambiguous | -0.338 | Destabilizing | 0.001 | N | 0.48 | neutral | None | None | None | None | N |
T/S | 0.1479 | likely_benign | 0.1877 | benign | -1.101 | Destabilizing | None | N | 0.249 | neutral | N | 0.424279696 | None | None | N |
T/V | 0.174 | likely_benign | 0.2156 | benign | -0.55 | Destabilizing | 0.055 | N | 0.446 | neutral | None | None | None | None | N |
T/W | 0.7041 | likely_pathogenic | 0.8227 | pathogenic | -1.05 | Destabilizing | 0.958 | D | 0.644 | neutral | None | None | None | None | N |
T/Y | 0.4277 | ambiguous | 0.5685 | pathogenic | -0.657 | Destabilizing | 0.667 | D | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.