Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34334 | 103225;103226;103227 | chr2:178533615;178533614;178533613 | chr2:179398342;179398341;179398340 |
N2AB | 32693 | 98302;98303;98304 | chr2:178533615;178533614;178533613 | chr2:179398342;179398341;179398340 |
N2A | 31766 | 95521;95522;95523 | chr2:178533615;178533614;178533613 | chr2:179398342;179398341;179398340 |
N2B | 25269 | 76030;76031;76032 | chr2:178533615;178533614;178533613 | chr2:179398342;179398341;179398340 |
Novex-1 | 25394 | 76405;76406;76407 | chr2:178533615;178533614;178533613 | chr2:179398342;179398341;179398340 |
Novex-2 | 25461 | 76606;76607;76608 | chr2:178533615;178533614;178533613 | chr2:179398342;179398341;179398340 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | 0.549 | N | 0.655 | 0.399 | 0.759655384941 | gnomAD-4.0.0 | 4.77297E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.573E-06 | 0 | 0 |
V/G | rs760991295 | -2.527 | 0.004 | N | 0.553 | 0.374 | 0.737734676174 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
V/G | rs760991295 | -2.527 | 0.004 | N | 0.553 | 0.374 | 0.737734676174 | gnomAD-4.0.0 | 1.59099E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77269E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.304 | likely_benign | 0.3012 | benign | -1.723 | Destabilizing | 0.002 | N | 0.267 | neutral | D | 0.530923316 | None | None | N |
V/C | 0.8381 | likely_pathogenic | 0.8653 | pathogenic | -1.244 | Destabilizing | 0.992 | D | 0.635 | neutral | None | None | None | None | N |
V/D | 0.7656 | likely_pathogenic | 0.763 | pathogenic | -1.922 | Destabilizing | 0.92 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/E | 0.4711 | ambiguous | 0.4963 | ambiguous | -1.758 | Destabilizing | 0.549 | D | 0.655 | neutral | N | 0.501408486 | None | None | N |
V/F | 0.2541 | likely_benign | 0.2922 | benign | -1.012 | Destabilizing | 0.739 | D | 0.653 | neutral | None | None | None | None | N |
V/G | 0.6111 | likely_pathogenic | 0.6612 | pathogenic | -2.199 | Highly Destabilizing | 0.004 | N | 0.553 | neutral | N | 0.508306943 | None | None | N |
V/H | 0.6661 | likely_pathogenic | 0.7019 | pathogenic | -1.915 | Destabilizing | 0.992 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/I | 0.0794 | likely_benign | 0.0809 | benign | -0.43 | Destabilizing | 0.25 | N | 0.553 | neutral | None | None | None | None | N |
V/K | 0.4182 | ambiguous | 0.4562 | ambiguous | -1.241 | Destabilizing | 0.617 | D | 0.645 | neutral | None | None | None | None | N |
V/L | 0.1822 | likely_benign | 0.2492 | benign | -0.43 | Destabilizing | 0.002 | N | 0.263 | neutral | N | 0.481612003 | None | None | N |
V/M | 0.1296 | likely_benign | 0.1774 | benign | -0.524 | Destabilizing | 0.045 | N | 0.391 | neutral | N | 0.502333992 | None | None | N |
V/N | 0.6058 | likely_pathogenic | 0.6301 | pathogenic | -1.391 | Destabilizing | 0.92 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/P | 0.9913 | likely_pathogenic | 0.9938 | pathogenic | -0.831 | Destabilizing | 0.92 | D | 0.663 | neutral | None | None | None | None | N |
V/Q | 0.4169 | ambiguous | 0.4759 | ambiguous | -1.313 | Destabilizing | 0.92 | D | 0.667 | neutral | None | None | None | None | N |
V/R | 0.3895 | ambiguous | 0.4261 | ambiguous | -1.073 | Destabilizing | 0.92 | D | 0.697 | prob.neutral | None | None | None | None | N |
V/S | 0.4374 | ambiguous | 0.4627 | ambiguous | -2.026 | Highly Destabilizing | 0.447 | N | 0.649 | neutral | None | None | None | None | N |
V/T | 0.24 | likely_benign | 0.2306 | benign | -1.73 | Destabilizing | 0.617 | D | 0.601 | neutral | None | None | None | None | N |
V/W | 0.8667 | likely_pathogenic | 0.9089 | pathogenic | -1.452 | Destabilizing | 0.992 | D | 0.69 | prob.neutral | None | None | None | None | N |
V/Y | 0.7047 | likely_pathogenic | 0.7358 | pathogenic | -1.057 | Destabilizing | 0.92 | D | 0.66 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.