Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34347 | 103264;103265;103266 | chr2:178533576;178533575;178533574 | chr2:179398303;179398302;179398301 |
N2AB | 32706 | 98341;98342;98343 | chr2:178533576;178533575;178533574 | chr2:179398303;179398302;179398301 |
N2A | 31779 | 95560;95561;95562 | chr2:178533576;178533575;178533574 | chr2:179398303;179398302;179398301 |
N2B | 25282 | 76069;76070;76071 | chr2:178533576;178533575;178533574 | chr2:179398303;179398302;179398301 |
Novex-1 | 25407 | 76444;76445;76446 | chr2:178533576;178533575;178533574 | chr2:179398303;179398302;179398301 |
Novex-2 | 25474 | 76645;76646;76647 | chr2:178533576;178533575;178533574 | chr2:179398303;179398302;179398301 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1187906800 | None | 0.011 | N | 0.129 | 0.178 | 0.30212335484 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92234E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs1187906800 | None | 0.011 | N | 0.129 | 0.178 | 0.30212335484 | gnomAD-4.0.0 | 6.56901E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.92234E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5633 | ambiguous | 0.4952 | ambiguous | -0.722 | Destabilizing | 0.919 | D | 0.553 | neutral | None | None | None | None | N |
K/C | 0.7952 | likely_pathogenic | 0.752 | pathogenic | -0.873 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/D | 0.8601 | likely_pathogenic | 0.8252 | pathogenic | -0.675 | Destabilizing | 0.851 | D | 0.575 | neutral | None | None | None | None | N |
K/E | 0.3846 | ambiguous | 0.3191 | benign | -0.554 | Destabilizing | 0.026 | N | 0.201 | neutral | N | 0.441685391 | None | None | N |
K/F | 0.8128 | likely_pathogenic | 0.7788 | pathogenic | -0.508 | Destabilizing | 0.996 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/G | 0.7988 | likely_pathogenic | 0.7473 | pathogenic | -1.099 | Destabilizing | 0.959 | D | 0.659 | neutral | None | None | None | None | N |
K/H | 0.3362 | likely_benign | 0.2932 | benign | -1.524 | Destabilizing | 0.988 | D | 0.684 | prob.neutral | None | None | None | None | N |
K/I | 0.4142 | ambiguous | 0.379 | ambiguous | 0.265 | Stabilizing | 0.988 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/L | 0.4531 | ambiguous | 0.4026 | ambiguous | 0.265 | Stabilizing | 0.919 | D | 0.666 | neutral | None | None | None | None | N |
K/M | 0.3219 | likely_benign | 0.2844 | benign | 0.252 | Stabilizing | 0.999 | D | 0.662 | neutral | N | 0.495330662 | None | None | N |
K/N | 0.6483 | likely_pathogenic | 0.5865 | pathogenic | -0.808 | Destabilizing | 0.896 | D | 0.557 | neutral | N | 0.439802666 | None | None | N |
K/P | 0.9472 | likely_pathogenic | 0.9462 | pathogenic | -0.034 | Destabilizing | 0.988 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/Q | 0.196 | likely_benign | 0.1679 | benign | -0.909 | Destabilizing | 0.811 | D | 0.563 | neutral | N | 0.438282514 | None | None | N |
K/R | 0.0879 | likely_benign | 0.0826 | benign | -0.761 | Destabilizing | 0.011 | N | 0.129 | neutral | N | 0.421659623 | None | None | N |
K/S | 0.6288 | likely_pathogenic | 0.5728 | pathogenic | -1.438 | Destabilizing | 0.919 | D | 0.533 | neutral | None | None | None | None | N |
K/T | 0.2583 | likely_benign | 0.2215 | benign | -1.107 | Destabilizing | 0.896 | D | 0.617 | neutral | N | 0.421254191 | None | None | N |
K/V | 0.3907 | ambiguous | 0.3511 | ambiguous | -0.034 | Destabilizing | 0.988 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/W | 0.821 | likely_pathogenic | 0.7887 | pathogenic | -0.411 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
K/Y | 0.708 | likely_pathogenic | 0.6677 | pathogenic | -0.063 | Destabilizing | 0.996 | D | 0.718 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.