Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34409 | 103450;103451;103452 | chr2:178533390;178533389;178533388 | chr2:179398117;179398116;179398115 |
N2AB | 32768 | 98527;98528;98529 | chr2:178533390;178533389;178533388 | chr2:179398117;179398116;179398115 |
N2A | 31841 | 95746;95747;95748 | chr2:178533390;178533389;178533388 | chr2:179398117;179398116;179398115 |
N2B | 25344 | 76255;76256;76257 | chr2:178533390;178533389;178533388 | chr2:179398117;179398116;179398115 |
Novex-1 | 25469 | 76630;76631;76632 | chr2:178533390;178533389;178533388 | chr2:179398117;179398116;179398115 |
Novex-2 | 25536 | 76831;76832;76833 | chr2:178533390;178533389;178533388 | chr2:179398117;179398116;179398115 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs879013405 | -2.204 | 0.324 | N | 0.509 | 0.335 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs879013405 | -2.204 | 0.324 | N | 0.509 | 0.335 | None | gnomAD-4.0.0 | 2.05287E-06 | None | None | None | None | N | None | 0 | 2.23614E-05 | None | 0 | 0 | None | 0 | 0 | 8.99418E-07 | 1.15931E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4926 | ambiguous | 0.469 | ambiguous | -2.358 | Highly Destabilizing | 0.116 | N | 0.478 | neutral | None | None | None | None | N |
I/C | 0.761 | likely_pathogenic | 0.7573 | pathogenic | -1.602 | Destabilizing | 0.944 | D | 0.547 | neutral | None | None | None | None | N |
I/D | 0.9485 | likely_pathogenic | 0.9526 | pathogenic | -2.236 | Highly Destabilizing | 0.818 | D | 0.639 | neutral | None | None | None | None | N |
I/E | 0.8293 | likely_pathogenic | 0.8395 | pathogenic | -2.086 | Highly Destabilizing | 0.818 | D | 0.623 | neutral | None | None | None | None | N |
I/F | 0.2983 | likely_benign | 0.2587 | benign | -1.423 | Destabilizing | 0.001 | N | 0.375 | neutral | N | 0.462274094 | None | None | N |
I/G | 0.9028 | likely_pathogenic | 0.885 | pathogenic | -2.845 | Highly Destabilizing | 0.818 | D | 0.621 | neutral | None | None | None | None | N |
I/H | 0.7443 | likely_pathogenic | 0.7575 | pathogenic | -2.185 | Highly Destabilizing | 0.981 | D | 0.613 | neutral | None | None | None | None | N |
I/K | 0.5977 | likely_pathogenic | 0.6304 | pathogenic | -1.804 | Destabilizing | 0.818 | D | 0.624 | neutral | None | None | None | None | N |
I/L | 0.2198 | likely_benign | 0.1818 | benign | -0.995 | Destabilizing | 0.001 | N | 0.161 | neutral | N | 0.487689827 | None | None | N |
I/M | 0.1265 | likely_benign | 0.1139 | benign | -0.872 | Destabilizing | 0.627 | D | 0.59 | neutral | N | 0.51276163 | None | None | N |
I/N | 0.6666 | likely_pathogenic | 0.6839 | pathogenic | -1.888 | Destabilizing | 0.912 | D | 0.65 | neutral | N | 0.507181307 | None | None | N |
I/P | 0.9756 | likely_pathogenic | 0.9733 | pathogenic | -1.425 | Destabilizing | 0.932 | D | 0.641 | neutral | None | None | None | None | N |
I/Q | 0.6862 | likely_pathogenic | 0.7044 | pathogenic | -1.871 | Destabilizing | 0.932 | D | 0.639 | neutral | None | None | None | None | N |
I/R | 0.4625 | ambiguous | 0.5294 | ambiguous | -1.379 | Destabilizing | 0.818 | D | 0.647 | neutral | None | None | None | None | N |
I/S | 0.5782 | likely_pathogenic | 0.5798 | pathogenic | -2.603 | Highly Destabilizing | 0.324 | N | 0.553 | neutral | N | 0.495064533 | None | None | N |
I/T | 0.1742 | likely_benign | 0.1621 | benign | -2.317 | Highly Destabilizing | 0.324 | N | 0.509 | neutral | N | 0.508817247 | None | None | N |
I/V | 0.087 | likely_benign | 0.0748 | benign | -1.425 | Destabilizing | 0.001 | N | 0.145 | neutral | N | 0.453595896 | None | None | N |
I/W | 0.8669 | likely_pathogenic | 0.8657 | pathogenic | -1.707 | Destabilizing | 0.981 | D | 0.627 | neutral | None | None | None | None | N |
I/Y | 0.6797 | likely_pathogenic | 0.682 | pathogenic | -1.448 | Destabilizing | 0.527 | D | 0.575 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.