Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34420 | 103483;103484;103485 | chr2:178533357;178533356;178533355 | chr2:179398084;179398083;179398082 |
N2AB | 32779 | 98560;98561;98562 | chr2:178533357;178533356;178533355 | chr2:179398084;179398083;179398082 |
N2A | 31852 | 95779;95780;95781 | chr2:178533357;178533356;178533355 | chr2:179398084;179398083;179398082 |
N2B | 25355 | 76288;76289;76290 | chr2:178533357;178533356;178533355 | chr2:179398084;179398083;179398082 |
Novex-1 | 25480 | 76663;76664;76665 | chr2:178533357;178533356;178533355 | chr2:179398084;179398083;179398082 |
Novex-2 | 25547 | 76864;76865;76866 | chr2:178533357;178533356;178533355 | chr2:179398084;179398083;179398082 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 0.122 | N | 0.315 | 0.295 | 0.511848488485 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6927 | likely_pathogenic | 0.6676 | pathogenic | -0.84 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
A/D | 0.9714 | likely_pathogenic | 0.9657 | pathogenic | -2.658 | Highly Destabilizing | 0.994 | D | 0.712 | prob.delet. | N | 0.489556696 | None | None | N |
A/E | 0.9063 | likely_pathogenic | 0.8916 | pathogenic | -2.378 | Highly Destabilizing | 0.996 | D | 0.728 | prob.delet. | None | None | None | None | N |
A/F | 0.7984 | likely_pathogenic | 0.7591 | pathogenic | -0.659 | Destabilizing | 0.996 | D | 0.723 | prob.delet. | None | None | None | None | N |
A/G | 0.4829 | ambiguous | 0.4528 | ambiguous | -1.634 | Destabilizing | 0.98 | D | 0.659 | neutral | N | 0.466834552 | None | None | N |
A/H | 0.9056 | likely_pathogenic | 0.8945 | pathogenic | -2.232 | Highly Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
A/I | 0.6938 | likely_pathogenic | 0.6557 | pathogenic | 0.327 | Stabilizing | 0.942 | D | 0.7 | prob.neutral | None | None | None | None | N |
A/K | 0.9422 | likely_pathogenic | 0.9351 | pathogenic | -1.117 | Destabilizing | 0.996 | D | 0.725 | prob.delet. | None | None | None | None | N |
A/L | 0.6243 | likely_pathogenic | 0.5978 | pathogenic | 0.327 | Stabilizing | 0.871 | D | 0.679 | prob.neutral | None | None | None | None | N |
A/M | 0.6645 | likely_pathogenic | 0.6205 | pathogenic | 0.037 | Stabilizing | 0.996 | D | 0.707 | prob.neutral | None | None | None | None | N |
A/N | 0.8889 | likely_pathogenic | 0.8649 | pathogenic | -1.682 | Destabilizing | 0.996 | D | 0.736 | prob.delet. | None | None | None | None | N |
A/P | 0.9935 | likely_pathogenic | 0.9925 | pathogenic | -0.119 | Destabilizing | 0.998 | D | 0.705 | prob.neutral | D | 0.530749958 | None | None | N |
A/Q | 0.7997 | likely_pathogenic | 0.7841 | pathogenic | -1.336 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
A/R | 0.8269 | likely_pathogenic | 0.8288 | pathogenic | -1.416 | Destabilizing | 0.996 | D | 0.725 | prob.delet. | None | None | None | None | N |
A/S | 0.2464 | likely_benign | 0.2227 | benign | -1.99 | Destabilizing | 0.925 | D | 0.614 | neutral | N | 0.393662158 | None | None | N |
A/T | 0.3812 | ambiguous | 0.3373 | benign | -1.583 | Destabilizing | 0.248 | N | 0.479 | neutral | N | 0.389792347 | None | None | N |
A/V | 0.4458 | ambiguous | 0.4051 | ambiguous | -0.119 | Destabilizing | 0.122 | N | 0.315 | neutral | N | 0.416560447 | None | None | N |
A/W | 0.9741 | likely_pathogenic | 0.9712 | pathogenic | -1.571 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
A/Y | 0.8757 | likely_pathogenic | 0.8587 | pathogenic | -0.991 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.