Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34437 | 103534;103535;103536 | chr2:178533306;178533305;178533304 | chr2:179398033;179398032;179398031 |
N2AB | 32796 | 98611;98612;98613 | chr2:178533306;178533305;178533304 | chr2:179398033;179398032;179398031 |
N2A | 31869 | 95830;95831;95832 | chr2:178533306;178533305;178533304 | chr2:179398033;179398032;179398031 |
N2B | 25372 | 76339;76340;76341 | chr2:178533306;178533305;178533304 | chr2:179398033;179398032;179398031 |
Novex-1 | 25497 | 76714;76715;76716 | chr2:178533306;178533305;178533304 | chr2:179398033;179398032;179398031 |
Novex-2 | 25564 | 76915;76916;76917 | chr2:178533306;178533305;178533304 | chr2:179398033;179398032;179398031 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 1.0 | N | 0.861 | 0.45 | 0.613554143916 | gnomAD-4.0.0 | 1.59101E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85763E-06 | 0 | 0 |
T/P | rs762313504 | -0.728 | 1.0 | N | 0.852 | 0.665 | 0.68404209341 | gnomAD-4.0.0 | 4.77395E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 5.65846E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.4981 | ambiguous | 0.3561 | ambiguous | -1.128 | Destabilizing | 0.999 | D | 0.631 | neutral | N | 0.483428285 | None | None | N |
T/C | 0.8999 | likely_pathogenic | 0.8366 | pathogenic | -1.085 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
T/D | 0.9684 | likely_pathogenic | 0.9391 | pathogenic | -1.506 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
T/E | 0.8903 | likely_pathogenic | 0.8043 | pathogenic | -1.394 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
T/F | 0.7806 | likely_pathogenic | 0.665 | pathogenic | -1.027 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
T/G | 0.9248 | likely_pathogenic | 0.8666 | pathogenic | -1.457 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
T/H | 0.7861 | likely_pathogenic | 0.659 | pathogenic | -1.622 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
T/I | 0.4992 | ambiguous | 0.3475 | ambiguous | -0.305 | Destabilizing | 1.0 | D | 0.861 | deleterious | N | 0.47551275 | None | None | N |
T/K | 0.7874 | likely_pathogenic | 0.6385 | pathogenic | -0.775 | Destabilizing | 1.0 | D | 0.855 | deleterious | N | 0.446419208 | None | None | N |
T/L | 0.4219 | ambiguous | 0.3004 | benign | -0.305 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
T/M | 0.2373 | likely_benign | 0.1614 | benign | -0.174 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
T/N | 0.7311 | likely_pathogenic | 0.573 | pathogenic | -1.209 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
T/P | 0.9687 | likely_pathogenic | 0.9462 | pathogenic | -0.548 | Destabilizing | 1.0 | D | 0.852 | deleterious | N | 0.519182723 | None | None | N |
T/Q | 0.7658 | likely_pathogenic | 0.6264 | pathogenic | -1.27 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
T/R | 0.738 | likely_pathogenic | 0.5755 | pathogenic | -0.674 | Destabilizing | 1.0 | D | 0.859 | deleterious | N | 0.483092084 | None | None | N |
T/S | 0.5409 | ambiguous | 0.4042 | ambiguous | -1.417 | Destabilizing | 0.999 | D | 0.614 | neutral | N | 0.477859622 | None | None | N |
T/V | 0.4186 | ambiguous | 0.2989 | benign | -0.548 | Destabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | N |
T/W | 0.9341 | likely_pathogenic | 0.8951 | pathogenic | -1.05 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
T/Y | 0.8565 | likely_pathogenic | 0.7629 | pathogenic | -0.719 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.