Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34944 | 105055;105056;105057 | chr2:178531785;178531784;178531783 | chr2:179396512;179396511;179396510 |
N2AB | 33303 | 100132;100133;100134 | chr2:178531785;178531784;178531783 | chr2:179396512;179396511;179396510 |
N2A | 32376 | 97351;97352;97353 | chr2:178531785;178531784;178531783 | chr2:179396512;179396511;179396510 |
N2B | 25879 | 77860;77861;77862 | chr2:178531785;178531784;178531783 | chr2:179396512;179396511;179396510 |
Novex-1 | 26004 | 78235;78236;78237 | chr2:178531785;178531784;178531783 | chr2:179396512;179396511;179396510 |
Novex-2 | 26071 | 78436;78437;78438 | chr2:178531785;178531784;178531783 | chr2:179396512;179396511;179396510 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs367770867 | -1.466 | None | N | 0.236 | 0.12 | None | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
I/V | rs367770867 | -1.466 | None | N | 0.236 | 0.12 | None | gnomAD-4.0.0 | 1.59089E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85753E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9849 | likely_pathogenic | 0.9885 | pathogenic | -1.99 | Destabilizing | 0.072 | N | 0.712 | prob.delet. | None | None | None | None | N |
I/C | 0.9843 | likely_pathogenic | 0.989 | pathogenic | -1.143 | Destabilizing | 0.909 | D | 0.779 | deleterious | None | None | None | None | N |
I/D | 0.999 | likely_pathogenic | 0.999 | pathogenic | -1.811 | Destabilizing | 0.726 | D | 0.883 | deleterious | None | None | None | None | N |
I/E | 0.997 | likely_pathogenic | 0.9972 | pathogenic | -1.791 | Destabilizing | 0.726 | D | 0.865 | deleterious | None | None | None | None | N |
I/F | 0.6855 | likely_pathogenic | 0.7342 | pathogenic | -1.419 | Destabilizing | 0.497 | N | 0.722 | prob.delet. | N | 0.368726428 | None | None | N |
I/G | 0.9971 | likely_pathogenic | 0.9975 | pathogenic | -2.344 | Highly Destabilizing | 0.726 | D | 0.861 | deleterious | None | None | None | None | N |
I/H | 0.9956 | likely_pathogenic | 0.996 | pathogenic | -1.647 | Destabilizing | 0.968 | D | 0.882 | deleterious | None | None | None | None | N |
I/K | 0.9925 | likely_pathogenic | 0.9926 | pathogenic | -1.438 | Destabilizing | 0.726 | D | 0.865 | deleterious | None | None | None | None | N |
I/L | 0.5406 | ambiguous | 0.6077 | pathogenic | -1.062 | Destabilizing | 0.025 | N | 0.418 | neutral | N | 0.486135176 | None | None | N |
I/M | 0.4783 | ambiguous | 0.5325 | ambiguous | -0.775 | Destabilizing | 0.497 | N | 0.697 | prob.neutral | D | 0.536083994 | None | None | N |
I/N | 0.9817 | likely_pathogenic | 0.9824 | pathogenic | -1.243 | Destabilizing | 0.859 | D | 0.888 | deleterious | N | 0.498666293 | None | None | N |
I/P | 0.9906 | likely_pathogenic | 0.9898 | pathogenic | -1.343 | Destabilizing | 0.726 | D | 0.887 | deleterious | None | None | None | None | N |
I/Q | 0.9931 | likely_pathogenic | 0.9937 | pathogenic | -1.432 | Destabilizing | 0.89 | D | 0.882 | deleterious | None | None | None | None | N |
I/R | 0.9905 | likely_pathogenic | 0.9904 | pathogenic | -0.827 | Destabilizing | 0.726 | D | 0.887 | deleterious | None | None | None | None | N |
I/S | 0.9871 | likely_pathogenic | 0.9885 | pathogenic | -1.818 | Destabilizing | 0.497 | N | 0.842 | deleterious | N | 0.498412804 | None | None | N |
I/T | 0.9837 | likely_pathogenic | 0.988 | pathogenic | -1.69 | Destabilizing | 0.124 | N | 0.725 | prob.delet. | N | 0.498159314 | None | None | N |
I/V | 0.2341 | likely_benign | 0.3117 | benign | -1.343 | Destabilizing | None | N | 0.236 | neutral | N | 0.469184211 | None | None | N |
I/W | 0.9934 | likely_pathogenic | 0.9944 | pathogenic | -1.549 | Destabilizing | 0.968 | D | 0.875 | deleterious | None | None | None | None | N |
I/Y | 0.9716 | likely_pathogenic | 0.9729 | pathogenic | -1.341 | Destabilizing | 0.726 | D | 0.794 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.