Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34946 | 105061;105062;105063 | chr2:178531779;178531778;178531777 | chr2:179396506;179396505;179396504 |
N2AB | 33305 | 100138;100139;100140 | chr2:178531779;178531778;178531777 | chr2:179396506;179396505;179396504 |
N2A | 32378 | 97357;97358;97359 | chr2:178531779;178531778;178531777 | chr2:179396506;179396505;179396504 |
N2B | 25881 | 77866;77867;77868 | chr2:178531779;178531778;178531777 | chr2:179396506;179396505;179396504 |
Novex-1 | 26006 | 78241;78242;78243 | chr2:178531779;178531778;178531777 | chr2:179396506;179396505;179396504 |
Novex-2 | 26073 | 78442;78443;78444 | chr2:178531779;178531778;178531777 | chr2:179396506;179396505;179396504 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | rs1185207035 | None | 0.999 | N | 0.707 | 0.535 | 0.774190524746 | gnomAD-4.0.0 | 2.05242E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99402E-07 | 0 | 3.31268E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8831 | likely_pathogenic | 0.9239 | pathogenic | -0.996 | Destabilizing | 0.983 | D | 0.439 | neutral | None | None | None | None | I |
L/C | 0.951 | likely_pathogenic | 0.9658 | pathogenic | -0.753 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
L/D | 0.9954 | likely_pathogenic | 0.9979 | pathogenic | -0.313 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | I |
L/E | 0.9588 | likely_pathogenic | 0.981 | pathogenic | -0.363 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | I |
L/F | 0.7462 | likely_pathogenic | 0.8424 | pathogenic | -0.706 | Destabilizing | 0.998 | D | 0.611 | neutral | None | None | None | None | I |
L/G | 0.9716 | likely_pathogenic | 0.9815 | pathogenic | -1.234 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | None | None | None | None | I |
L/H | 0.9411 | likely_pathogenic | 0.9713 | pathogenic | -0.369 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
L/I | 0.3326 | likely_benign | 0.4107 | ambiguous | -0.462 | Destabilizing | 0.923 | D | 0.397 | neutral | None | None | None | None | I |
L/K | 0.9193 | likely_pathogenic | 0.9576 | pathogenic | -0.629 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | I |
L/M | 0.3662 | ambiguous | 0.4342 | ambiguous | -0.437 | Destabilizing | 0.997 | D | 0.618 | neutral | N | 0.431009825 | None | None | I |
L/N | 0.9653 | likely_pathogenic | 0.9807 | pathogenic | -0.465 | Destabilizing | 0.999 | D | 0.724 | prob.delet. | None | None | None | None | I |
L/P | 0.9897 | likely_pathogenic | 0.9945 | pathogenic | -0.606 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | N | 0.463159529 | None | None | I |
L/Q | 0.8226 | likely_pathogenic | 0.9055 | pathogenic | -0.663 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | N | 0.388330909 | None | None | I |
L/R | 0.8568 | likely_pathogenic | 0.9305 | pathogenic | -0.029 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | N | 0.424427782 | None | None | I |
L/S | 0.9457 | likely_pathogenic | 0.9712 | pathogenic | -1.021 | Destabilizing | 0.998 | D | 0.666 | neutral | None | None | None | None | I |
L/T | 0.8645 | likely_pathogenic | 0.9146 | pathogenic | -0.957 | Destabilizing | 0.983 | D | 0.549 | neutral | None | None | None | None | I |
L/V | 0.2834 | likely_benign | 0.3895 | ambiguous | -0.606 | Destabilizing | 0.198 | N | 0.181 | neutral | N | 0.376809981 | None | None | I |
L/W | 0.9236 | likely_pathogenic | 0.9648 | pathogenic | -0.72 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
L/Y | 0.9476 | likely_pathogenic | 0.9688 | pathogenic | -0.496 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.