Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 34954 | 105085;105086;105087 | chr2:178531755;178531754;178531753 | chr2:179396482;179396481;179396480 |
N2AB | 33313 | 100162;100163;100164 | chr2:178531755;178531754;178531753 | chr2:179396482;179396481;179396480 |
N2A | 32386 | 97381;97382;97383 | chr2:178531755;178531754;178531753 | chr2:179396482;179396481;179396480 |
N2B | 25889 | 77890;77891;77892 | chr2:178531755;178531754;178531753 | chr2:179396482;179396481;179396480 |
Novex-1 | 26014 | 78265;78266;78267 | chr2:178531755;178531754;178531753 | chr2:179396482;179396481;179396480 |
Novex-2 | 26081 | 78466;78467;78468 | chr2:178531755;178531754;178531753 | chr2:179396482;179396481;179396480 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1689198573 | None | 1.0 | N | 0.783 | 0.437 | 0.769452518284 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
P/S | None | None | 1.0 | N | 0.726 | 0.405 | 0.357313475932 | gnomAD-4.0.0 | 1.59089E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85755E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1625 | likely_benign | 0.1891 | benign | -0.743 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | N | 0.475528606 | None | None | N |
P/C | 0.8213 | likely_pathogenic | 0.8525 | pathogenic | -0.574 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
P/D | 0.8631 | likely_pathogenic | 0.8896 | pathogenic | -0.668 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
P/E | 0.7044 | likely_pathogenic | 0.7634 | pathogenic | -0.789 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
P/F | 0.8295 | likely_pathogenic | 0.8651 | pathogenic | -0.96 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
P/G | 0.6228 | likely_pathogenic | 0.6853 | pathogenic | -0.897 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
P/H | 0.5156 | ambiguous | 0.5709 | pathogenic | -0.452 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
P/I | 0.6942 | likely_pathogenic | 0.7491 | pathogenic | -0.481 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
P/K | 0.6968 | likely_pathogenic | 0.7462 | pathogenic | -0.617 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
P/L | 0.2982 | likely_benign | 0.3305 | benign | -0.481 | Destabilizing | 1.0 | D | 0.783 | deleterious | N | 0.482051934 | None | None | N |
P/M | 0.7042 | likely_pathogenic | 0.7443 | pathogenic | -0.32 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
P/N | 0.745 | likely_pathogenic | 0.7836 | pathogenic | -0.277 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
P/Q | 0.4127 | ambiguous | 0.4756 | ambiguous | -0.589 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | N | 0.445379058 | None | None | N |
P/R | 0.423 | ambiguous | 0.5015 | ambiguous | None | Stabilizing | 1.0 | D | 0.779 | deleterious | N | 0.483340013 | None | None | N |
P/S | 0.3076 | likely_benign | 0.3531 | ambiguous | -0.631 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | N | 0.460865798 | None | None | N |
P/T | 0.3474 | ambiguous | 0.3928 | ambiguous | -0.657 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | N | 0.479376988 | None | None | N |
P/V | 0.5346 | ambiguous | 0.5992 | pathogenic | -0.533 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
P/W | 0.9346 | likely_pathogenic | 0.9499 | pathogenic | -1.019 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
P/Y | 0.8179 | likely_pathogenic | 0.854 | pathogenic | -0.733 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.